Transcript Information: S_Transcript_220832.p1


Annotated TAIR IDAT3G01160.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUC153 (InterPro:IPR012580); Has 36638 Blast hits to 21323 proteins in 1057 species: Archae - 109; Bacteria - 2369; Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses - 489; Other Eukaryotes - 13360 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:54655-57449 | Reverse length=713
E-Value8E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0301806929747
Replicate 20.14234057779042
Replicate 30.11898539408775
Condition 2: 8 Hour
Replicate 10.68791581668171
Replicate 20.14433450735307
Replicate 30.13752159745149
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_220832.p1 GENE.S_Transcript_220832~~S_Transcript_220832.p1 ORF type:5prime_partial len:155 (-),score=37.87 S_Transcript_220832:175-639(-)
GAATCGGAACCGGAGAGTGATGGTTCAACGACCTCCACAACTGACACAGAAGATGAGGCTGATGTGGATATGTCAGGAGATGATGATTCTATTGAGGTGGAGAATGTACCAGTAATTGAGAAAGAAACGCATCGATTGGCTGTTGTTAACATGGACTGGAATCAAATCAAGGCTGTTGATTTGTTGGCGACATTGAAATCTTTCCTTCCAAAAGGAGGGCAAATTAAGTCCGTGGCTGTCTATCCTTCGGAATTTGGTCTCAAGCGTATGGAAGAGGAAGCAGTTCGTGGTCCAGTTGCCTTATTTGATGTTGAGAAAAAAGCAAATGACGAAGATGACGACGGCGATGAGATAGATACTGAAAAGTTGCGTGCCTATGAGAGAAGTAAGCTAAGGTGGTTTTCCATAGGACGATTCTTTTCTTATATCTTTAGGACAACAGGAGCATATCTGTTGAGCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_220832.p1 GENE.S_Transcript_220832~~S_Transcript_220832.p1 ORF type:5prime_partial len:155 (-),score=37.87 S_Transcript_220832:175-639(-)
ESEPESDGSTTSTTDTEDEADVDMSGDDDSIEVENVPVIEKETHRLAVVNMDWNQIKAVDLLATLKSFLPKGGQIKSVAVYPSEFGLKRMEEEAVRGPVALFDVEKKANDEDDDGDEIDTEKLRAYERSKLRWFSIGRFFSYIFRTTGAYLLSF*

Click here to download the sequence:
Link to NCBI Protein BLAST