Transcript Information: S_Transcript_220847.p1


Annotated TAIR IDAT4G38100.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17887033-17888177 | Reverse length=193
E-Value1.4E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.047696734801
Replicate 241.880593510932
Replicate 344.197855245962
Condition 2: 8 Hour
Replicate 124.318427554625
Replicate 221.272880636372
Replicate 325.728602021451
Condition 3: 24 Hour
Replicate 146.525769399265
Replicate 252.087005552658
Replicate 348.408625577539


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_220847.p1 GENE.S_Transcript_220847~~S_Transcript_220847.p1 ORF type:5prime_partial len:285 (+),score=36.88,CAAD|PF14159.2|8.4e-26 S_Transcript_220847:1-855(+)
AAAAGCCCAAATTGGAACCAAAAAAAATCCCCAAAATTCCCCCGCCACACAGGAACTGGAAAAACCCTAGCCGGTGAGCCCTTAAAAACCACTACCATTAGTGAAGCGTATCTTCGTGTTGGTCCTTTCCTCTCCCTTTCCGTAGACATTTGCCGATTGATTCTAGAAGGTCCGAGAAGGAGGAGCTTGAAAAAAAAAAAAAATATGGAGCTTTGCTGTACTACTCGTGCTCTCTCAACGCCTTCACTTCAACCTCACCACCGTCTTTTCCCCAAAGCCCCTCGTCTTCAGTTCAATCACTCCGGATCTCTCAAGCACCGAACCCGTTTCTTAGGAGCGCTGTGTCACACAAGGACATTGTTGAGGGCAGCATCATCCGACGAGACTTCGAGTGCCGGTAGTAACTTTTCAGGGGAGAAAACCGACTCTATTGCAACTCTTGAAGATGTTCCCTCGGCGGAGAGGAACGTCACTCTGGATGGGGTATCACCAGTCAACCAAAATGTGTATAATGAGACCAGGCAAGAAGAGTCATCGGAAAATGAATCTTCCGAGGACAACCCTATGCAGCCCCTTAACGAGCTTTTGGACAAGTTTGACATAAATTTGGAGTCTGAGGATTCATACACAATTTTCCTGTATGGTGGTGGTGCCTTGGTGGCTCTGTGGTTGCTTACGGCTGTTGTTGGTGCAATCGATTCTATCCCAGTGTTTCCAAAATTGATGGAAGTCGTTGGTCTAGGGTACTCCCTATGGTTCACCACGCGATATCTGCTATTCAAGAGAAATAGAGAAGAGCTAGGTTCCAAAATTGAAGAGCTCAAGCGAGAGGTTTTGGGTTCAGGAGACAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_220847.p1 GENE.S_Transcript_220847~~S_Transcript_220847.p1 ORF type:5prime_partial len:285 (+),score=36.88,CAAD|PF14159.2|8.4e-26 S_Transcript_220847:1-855(+)
KSPNWNQKKSPKFPRHTGTGKTLAGEPLKTTTISEAYLRVGPFLSLSVDICRLILEGPRRRSLKKKKNMELCCTTRALSTPSLQPHHRLFPKAPRLQFNHSGSLKHRTRFLGALCHTRTLLRAASSDETSSAGSNFSGEKTDSIATLEDVPSAERNVTLDGVSPVNQNVYNETRQEESSENESSEDNPMQPLNELLDKFDINLESEDSYTIFLYGGGALVALWLLTAVVGAIDSIPVFPKLMEVVGLGYSLWFTTRYLLFKRNREELGSKIEELKREVLGSGDN*

Click here to download the sequence:
Link to NCBI Protein BLAST