Transcript Information: S_Transcript_22085.p1


Annotated TAIR IDAT1G71980.1
Annotated Gene NameProtease-associated (PA) RING/U-box zinc finger family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27098250-27099881 | Forward length=448
E-Value2.3E-184
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.799356785464
Replicate 236.093949583127
Replicate 335.753023460313
Condition 2: 8 Hour
Replicate 135.168187540535
Replicate 233.214345458542
Replicate 337.209242749046
Condition 3: 24 Hour
Replicate 138.563884232299
Replicate 229.274089952782
Replicate 329.149160968193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22085.p1 GENE.S_Transcript_22085~~S_Transcript_22085.p1 ORF type:complete len:456 (+),score=74.96,PA|PF02225.18|1.6e-13,zf-RING_2|PF13639.2|6.9e-11,zf-RING_11|PF17123.1|7.9e-10 S_Transcript_22085:527-1894(+)
ATGGGTGTTGGACTTGCTATTGGAATTCAGCTGTTTCTTTTTAACTGGATGTTAATGATGGTTCCCTTTTGCTCTGCTACTATGATCTTGATGAGGCCTAATCTTACTCTCAGTTTTGAAGATATTGCGGCTAATTTTGCTCCACTTCCACAGTCCAATGGTATATGTGGAAAATTGTTCACAGCAGAGCCTCTTGATGCTTGTTCTGTGTTGAAGAATGAGGTGGAGGATCTTGGGAATTGTACTGCTCCCTTTGCATTGATGATAAGAGGTGGATGCAGCTTTGAAGATAAAGTCAGGAGGGCTCAGAAGGCAGGGTTTAAAGCTGCCATTGTCTATGACAATGAGGCCAGTGGCGCTTTGGTTGCAATGGCAGGGAACTCTGCTGGTATAAAAATTCCTGCTGTATTCATTTCGAAATCCTCTGGAGAAAAATTAAAGACCTTTGCTGGCCTCGACATGGAGCTGTGGTTAATCCCAGGCTATGAAAACTCGGCTTGGTCGATCATGGCAATTTCTTTCATCTCGTTACTTGCAATGTCGGCGGTGCTGGCAACTTGTTTCTTTGTTAGGAGGCATCGCATTAGACGTGAGAGGTCTCATGCCCGAGTTCGTGAATTTCATGGGATGAGCAGTCGTTTAGTTAAAGCTATGCCAAGCTTGATATTCACAGCTGTAACAGAGGACAATTGTACATCATCAACATGTGCCATATGCCTTGAGGACTACAATGTTGGTGACAAGCTCCGGATTCTGCCATGTCGCCACAAATTTCATGCGTTGTGTGTGGATTGTTGGCTCACTTCTTGGAGAACTTTTTGTCCTGTTTGTAAACGTGATGCGCGGACCAGTACTGGTGAACCGCCGGCTTCTGAGTCTACACCATTGCTCTCATCGAATCCATCATCTGCTGCTTCTTCGCCATTGTCTTCTTTCAGGTCATCATTCAGGTCGTCCTCTGTACGTTCCTCAGCAATACAAATAGCTTCACCCAGTCCGCGATCTAATGCTGCTTCTCGCAACCAATCTGTTTCAAGTAGTCCTCAAATTCCCAGGCCACTACGCTCTTATCATAATCAACATACACCTTCTATGAGTTTAAGTCAGAGCTCCGTGGATCTTAGGAATATGTCTTCTCAAAGATCATATGCTTCTCAGTTTATTTCTCCCCATTCTCTAGGTTACCCATCTCCATCACCTCTCAATACTAGGTACATGTCTACCTATTATCCAAGTCCTAGTAATGCTTCATCAAGTTATCTTGGGTCTTCTTCGATAAGACAGCCAAATCCACTGCATTATAGTGAGTCTGCAGCAAGTTTTTCTCCGTATGCTTCTGCACAATCCCTTCCTGGGGTTGATTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22085.p1 GENE.S_Transcript_22085~~S_Transcript_22085.p1 ORF type:complete len:456 (+),score=74.96,PA|PF02225.18|1.6e-13,zf-RING_2|PF13639.2|6.9e-11,zf-RING_11|PF17123.1|7.9e-10 S_Transcript_22085:527-1894(+)
MGVGLAIGIQLFLFNWMLMMVPFCSATMILMRPNLTLSFEDIAANFAPLPQSNGICGKLFTAEPLDACSVLKNEVEDLGNCTAPFALMIRGGCSFEDKVRRAQKAGFKAAIVYDNEASGALVAMAGNSAGIKIPAVFISKSSGEKLKTFAGLDMELWLIPGYENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERSHARVREFHGMSSRLVKAMPSLIFTAVTEDNCTSSTCAICLEDYNVGDKLRILPCRHKFHALCVDCWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSNPSSAASSPLSSFRSSFRSSSVRSSAIQIASPSPRSNAASRNQSVSSSPQIPRPLRSYHNQHTPSMSLSQSSVDLRNMSSQRSYASQFISPHSLGYPSPSPLNTRYMSTYYPSPSNASSSYLGSSSIRQPNPLHYSESAASFSPYASAQSLPGVDS*

Click here to download the sequence:
Link to NCBI Protein BLAST