Transcript Information: S_Transcript_22086.p1


Annotated TAIR IDAT1G71980.1
Annotated Gene NameProtease-associated (PA) RING/U-box zinc finger family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:27098250-27099881 | Forward length=448
E-Value4E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.631938783606
Replicate 220.201412771025
Replicate 319.174953893371
Condition 2: 8 Hour
Replicate 119.420392670937
Replicate 219.76272485296
Replicate 319.570381175789
Condition 3: 24 Hour
Replicate 124.826195133231
Replicate 217.433701212575
Replicate 316.021943840471


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22086.p1 GENE.S_Transcript_22086~~S_Transcript_22086.p1 ORF type:complete len:403 (+),score=60.29,PA|PF02225.18|1.3e-13,zf-RING_2|PF13639.2|5.8e-11,zf-RING_11|PF17123.1|6.7e-10 S_Transcript_22086:524-1732(+)
ATGGGTGTTGGACTTGTTAGTGGAATTCAGCTGTTTCTTTTTTACTGGATATTAATGATGGTACCCTTTTCCTCTGCTACTATGATCTTGATGAGGCCTAATCTTACTCTCAGTTTTGAAGATATTGCGGCTAATTTTGCTCCACTTCCACAGTCCAATGGTATATGTGGAAAATTGTTCACAGCAGAGCCTCTTGATGCTTGTTCTGTGTTGAAGAATGAGGTGGAGGATCTTGGGAATTGTACTGCTCCCTTTGCATTGATGATAAGAGGTGGATGCAGCTTTGAAGATAAAGTCAGGAGGGCTCAGAAGGCAGGGTTTAAAGCTGCCATTGTCTATGACAATGAGGCCAGTGGCGCTTTGGTTGCAATGGCAGGGAACTCTGCTGGTATAAAAATTCCTGCTGTATTCATTTCGAAATCCTCTGGAGAAAAATTAAAGACCTTTGCTGGCCTCGACATGGAGCTGTGGTTAATCCCAGGCTATGAAAACTCGGCTTGGTCGATCATGGCAATTTCTTTCATCTCGTTACTTGCAATGTCGGCGGTGCTGGCAACTTGTTTCTTTGTTAGGAGGCATCGCATTAGACGTGAGAGGTCTCATGCCCGAGTTCGTGAATTTCATGGGATGAGCAGTCGTTTAGTTAAAGCTATGCCAAGCTTGATATTCACAGCTGTAACAGAGGACAATTGTACATCATCAACATGTGCCATATGCCTTGAGGACTACAATGTTGGTGACAAGCTCCGGATTCTGCCATGTCGCCACAAATTTCATGCGTTGTGTGTGGATTGTTGGCTCACTTCTTGGAGAACTTTTTGTCCTGTTTGTAAACGTGATGCACGGACTAGTACTGGTGAACCGCCGGCTTCGGAGTCTACACCATTGCTATCATCGAATCCATCATCTGCTGCTTCTTCGCCATTGTCTTCTTTCAGGTCATCATTCAGGTCGTCCTCTGTACGTTCCTCAGCAATACAAATAGCTTCACCCAGTCCGCGATCTAATGCTGCTTCTCGCAACCAATCTGTTTCAAGTAGTCCTCAAATTCCCAGGCCACTACGCTCTTATCATAATCAACATACACCTTCTATGAGTTTAAGTCAGAGCTCCGTGGATCTTAGGAATGTCTTCTCAAAGATCATATGCTTCTCAGTTTATTTCTCCCCATTCTCTAGGTTACCCATCTCCATCACCTCTCAATACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22086.p1 GENE.S_Transcript_22086~~S_Transcript_22086.p1 ORF type:complete len:403 (+),score=60.29,PA|PF02225.18|1.3e-13,zf-RING_2|PF13639.2|5.8e-11,zf-RING_11|PF17123.1|6.7e-10 S_Transcript_22086:524-1732(+)
MGVGLVSGIQLFLFYWILMMVPFSSATMILMRPNLTLSFEDIAANFAPLPQSNGICGKLFTAEPLDACSVLKNEVEDLGNCTAPFALMIRGGCSFEDKVRRAQKAGFKAAIVYDNEASGALVAMAGNSAGIKIPAVFISKSSGEKLKTFAGLDMELWLIPGYENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERSHARVREFHGMSSRLVKAMPSLIFTAVTEDNCTSSTCAICLEDYNVGDKLRILPCRHKFHALCVDCWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSNPSSAASSPLSSFRSSFRSSSVRSSAIQIASPSPRSNAASRNQSVSSSPQIPRPLRSYHNQHTPSMSLSQSSVDLRNVFSKIICFSVYFSPFSRLPISITSQY*

Click here to download the sequence:
Link to NCBI Protein BLAST