Transcript Information: S_Transcript_220944.p1


Annotated TAIR IDAT3G11960.1
Annotated Gene NameCleavage and polyadenylation specificity factor (CPSF) A subunit protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3786431-3793160 | Forward length=1379
E-Value5E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8488008170692
Replicate 23.1863992231146
Replicate 33.0007376808783
Condition 2: 8 Hour
Replicate 13.3528035964779
Replicate 22.7402447145552
Replicate 32.7667736379409
Condition 3: 24 Hour
Replicate 13.075056725367
Replicate 22.5688415315056
Replicate 32.9049155347757


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_220944.p1 GENE.S_Transcript_220944~~S_Transcript_220944.p1 ORF type:3prime_partial len:547 (-),score=99.35,MMS1_N|PF10433.5|6e-71 S_Transcript_220944:2-1639(-)
ATGTTCTTTCTCAGTTTGTTGAGGGAGGGTCTTTGGCACATACAGTTACTGAAGTTCCTGGATCTGGGGGACTTGCATTGTTATTTAGGATGGGGGATATTTTGCTTATGGATCTTAGGGATGCTTGTAATCCTGTTTGTGTGCAAAAAAACAGTTCTCACTTCCGCAGTTTCTATGATCGAGGAGCAGAATTGTATGGAAGAACCTTTCAGAATACATGACGGTGATGATGAGGGTTTCATTGCTGCCCGTGCTCTTCTAGAGCTGCAAGACTATGGTATGGATATTAGTAAAGGTGATGATCCAATGAGCATTGACAATGATACAGGGAATGGGAAATCTGTACCCAAATATGCCTGCTCATGGAGTTGGGAACCAGAGGATCCTGGGATCAAAGCAAATCCAAGGATGATGTTTTCTGTGGATACAGGGGAAGTTTTCTTGATTGAAATTACTGTTGAGCCTGATGGCCATAGTATCAGTTTGTCTGATTTTCTTTATCACGGTCTACCCTGCAAAGCGCTATTATGGACTGAAGGTGGGTTCTTGGCAGCAATTGTGGAGATGGGTGATGGAATTGTCCTAAAACTACAAGATGGGAGGCTAGAGTATTCAAGTCCAATTCAAAATATTGCTCCAATCTTGGACATGTCAGTTATGGACTACCACAATGAAAAGCATGATCAGATGTTTGCTTGCTGTGGAACAGCTCCTGAAGGGTCACTGAGAATTATTAGAAGTGGCATCAGTGTGGAAAGATTATTGAGAACAGCTCCCATATATCAAGGCATAACTGCAACATGGACTGTTAGGATGAGGTTAAATGATACGTACCATTCTTTTCTTGTGCTTTCTTTTGTTGAAGAAACTAGAGTGTTGTCTGTTGGTGTAAGCTTTACAGATGTGACCGATTCAGTTGGTTTTCAGCCTGATGTTTGTACTTTGGCCTGTGGTCTTGTTGATGATGGTTTGTTGGTTCAAATCCATCAAAATTCAGTTAGACTTTGCTTACCTACTGCAGTTGCTCATCCTGAGGGTATTCCAATGTCTTTTCCAGCATGCACTTCCTGGTCTCCTGATAATATTGGCATCAACCTGGGCGCAGTTGGACATAATTTTATTGTTGTGGCTACCTCAAATCCTTGCTTCCTTATAATTCTCGGTGTGAAATATGTGTCTTTACATCACTATGAAGTATATGAGATGCAACATATTAAACTTCAGAGTGAGTTGTCATGCATATCTATACCTCAAAAACACATTACAAGGAAAGAATCTGTTAATTTACCAGCTGGAGTTGATCTTGGTCGTACATTTGTAATTGGGACACATAAGCCATCTGTAGAAATTCTATCTTATACACATGGTCAAGGCATACGAGTTCTTGCTACTGGGATCATCTCACTAACAAGTACAACAGGAACTGCTATAAGTGGTTGTGTCCCTCAGGATGTAAGGCTTGTACTTGTTGATAGGTTATATGTTCTCTCTGGGTTAAGAAATGGAATGCTACTACGCTTTGAGTGGCCTACTATATCCTGGGGATCTGAATTACCTAGTCATAGGACCTCCATATTTGCAAAATCTGGTTTGTTAAGGACATCGGCTACAGCTGGTATTGATCCTCAACTAAGTGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_220944.p1 GENE.S_Transcript_220944~~S_Transcript_220944.p1 ORF type:3prime_partial len:547 (-),score=99.35,MMS1_N|PF10433.5|6e-71 S_Transcript_220944:2-1639(-)
MFFLSLLREGLWHIQLLKFLDLGDLHCYLGWGIFCLWILGMLVILFVCKKTVLTSAVSMIEEQNCMEEPFRIHDGDDEGFIAARALLELQDYGMDISKGDDPMSIDNDTGNGKSVPKYACSWSWEPEDPGIKANPRMMFSVDTGEVFLIEITVEPDGHSISLSDFLYHGLPCKALLWTEGGFLAAIVEMGDGIVLKLQDGRLEYSSPIQNIAPILDMSVMDYHNEKHDQMFACCGTAPEGSLRIIRSGISVERLLRTAPIYQGITATWTVRMRLNDTYHSFLVLSFVEETRVLSVGVSFTDVTDSVGFQPDVCTLACGLVDDGLLVQIHQNSVRLCLPTAVAHPEGIPMSFPACTSWSPDNIGINLGAVGHNFIVVATSNPCFLIILGVKYVSLHHYEVYEMQHIKLQSELSCISIPQKHITRKESVNLPAGVDLGRTFVIGTHKPSVEILSYTHGQGIRVLATGIISLTSTTGTAISGCVPQDVRLVLVDRLYVLSGLRNGMLLRFEWPTISWGSELPSHRTSIFAKSGLLRTSATAGIDPQLSG

Click here to download the sequence:
Link to NCBI Protein BLAST