Transcript Information: S_Transcript_220950.p1


Annotated TAIR IDAT3G11960.1
Annotated Gene NameCleavage and polyadenylation specificity factor (CPSF) A subunit protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3786431-3793160 | Forward length=1379
E-Value2E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8178709132654
Replicate 24.6598133117165
Replicate 35.246640437576
Condition 2: 8 Hour
Replicate 15.423267365133
Replicate 25.4001013957961
Replicate 33.6751461387899
Condition 3: 24 Hour
Replicate 16.3086516977147
Replicate 25.1775086790794
Replicate 34.3486283457097


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_220950.p1 GENE.S_Transcript_220950~~S_Transcript_220950.p1 ORF type:3prime_partial len:232 (-),score=36.26,MMS1_N|PF10433.5|2.3e-20 S_Transcript_220950:3-695(-)
ATGGCGGTTACAGAGGAAGAATCATCTTCATCAGCCCATTCTCGATCCCCTCCATCGAAAGACGTTCACGTTCACTACCTCGCCAAGTGTGCTCTTCGTAGCTCCGTTGTTCTCCAAGTCGTTCACGGTCGTATTCGCTCTCCGACTTCTTACGACGTCGTTTTCGGCAAGGAGACGTCTATTGAGTTGGTGGTAATTGGCGATGATGGTATTGTTCAGTCTGTCTGTGAGCAGCCAGTGTTTGGCATGATAAAAGACCTGGCTGTTTTGCCCTGGAATGAGAAGTTCCAGACACGAAATATACAGATGCGGGGGAAAGACCTGTTGCTCGTTACTTCTGATTCTGGAAAGCTTTCATTCCTCACATTTTGCAATGAAATGCACAGGTTCTTTCCAGTGACTCATGTGCAACTCTCTGACCCTGGAAATTCAAGGCATCAGATTGGCAGACAACTTGCTGTTGATCGCAGTGGCTGTTATATTGCTGTTAGTGCGTACGAAGAGCGTCTGGCTCTGTTCTCTGTTTCAGCATCTAGCGACATTGATATGATTGATAAGCGAATAACATATCCTCCTGAACCTGAAGATGACTTGATTAGCAGAGAAATCCAGAAGACAAGAAAATCTATTTTACTTAGCTCCCACACAACAGAGTCAGTTGCTGCAGACTCTGGTTCCATTCCGCCAATCCCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_220950.p1 GENE.S_Transcript_220950~~S_Transcript_220950.p1 ORF type:3prime_partial len:232 (-),score=36.26,MMS1_N|PF10433.5|2.3e-20 S_Transcript_220950:3-695(-)
MAVTEEESSSSAHSRSPPSKDVHVHYLAKCALRSSVVLQVVHGRIRSPTSYDVVFGKETSIELVVIGDDGIVQSVCEQPVFGMIKDLAVLPWNEKFQTRNIQMRGKDLLLVTSDSGKLSFLTFCNEMHRFFPVTHVQLSDPGNSRHQIGRQLAVDRSGCYIAVSAYEERLALFSVSASSDIDMIDKRITYPPEPEDDLISREIQKTRKSILLSSHTTESVAADSGSIPPIP

Click here to download the sequence:
Link to NCBI Protein BLAST