Transcript Information: S_Transcript_22107.p1


Annotated TAIR IDAT5G26040.2
Annotated Gene Namehistone deacetylase 2
Annotated Gene Symbol(s)HDA2
Annotation TypeOrtholog
Chromosome Positionchr5:9099321-9101598 | Reverse length=387
E-Value6.2E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8444654321412
Replicate 21.0922173048275
Replicate 31.7651463578364
Condition 2: 8 Hour
Replicate 17.1788442651735
Replicate 26.3497656205165
Replicate 39.0047144997941
Condition 3: 24 Hour
Replicate 12.6675270269042
Replicate 22.9919223203099
Replicate 32.0810267660987


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22107.p1 GENE.S_Transcript_22107~~S_Transcript_22107.p1 ORF type:3prime_partial len:303 (+),score=60.91,Hist_deacetyl|PF00850.15|2e-41 S_Transcript_22107:848-1753(+)
ATGTTGACGTCTTCTTCATCTTCGGAAGCTGAAACTATTCGTCGCAGTCGTATTCTCTCCAGTAATCTCTACTTCGATGTTCCTCTTTCTAAGGCACCGCTGATTTATTCGTCGTCTTATAATATTGCGTTCATGGGAATTGAGAAATTGCATCCATTTGATTCTTCAAAATGGGGTCGCATATGTCTGTTCCTTTCCTCGGAGGGTGTATTGGACAAAAAGCGTATTGTTGAGCCTAAGGAGGCTTCAAGAGATGATCTGTTAGTGGTGCATCTAGAGAAATACTTGGATAGTCTGAAAAACAGTTTGACCGTGGCCACTATTGTGGAGGTGCCACCAGTTGCAATGTTGCCCAATTGCATCGTACAGCAAAAAGTTCTTTACCCTTTCAGAAAGCAGGTTGGGGGATCTATTCTAGCTGCAAAGCTTGCGAAGGAGCGAGGATGGGCAATCAATGTTGGTGGAGGTTTCCATCATTGTTCTGCTAATAAGGGAGGTGGTTTTTGTGCTTATGCTGACATCTCCCTGTGCATTCACTTTGCCTTTATTCGTTTAAATATTTCCAGGGTTATGATTATTGATCTTGATGCACATCAAGGAAATGGTCATGAAACAGATTTTGCTGGAGAAAGAAGAGTGTACATTCTTGATATATACAACCCTAACATATATCCATTTGACTATACAGCAAGGAGGTACATTGATCAGAAGGTTGAAGTTGAGAGTGGAACATCAACAAATGAGTACTTGCAGAAGTTAGATGATGCACTTGAGTTTGCAGGGCATATGTTTCATCCTGAGTTGGTGGTGTACAACGCTGGTACGGACATTCTGGATGGCGATCCGCTTGGTAGGCTGAGGGTTAGTCCTGATGGTATAATTAAGAGAGATGAGAAGGTTTTCGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22107.p1 GENE.S_Transcript_22107~~S_Transcript_22107.p1 ORF type:3prime_partial len:303 (+),score=60.91,Hist_deacetyl|PF00850.15|2e-41 S_Transcript_22107:848-1753(+)
MLTSSSSSEAETIRRSRILSSNLYFDVPLSKAPLIYSSSYNIAFMGIEKLHPFDSSKWGRICLFLSSEGVLDKKRIVEPKEASRDDLLVVHLEKYLDSLKNSLTVATIVEVPPVAMLPNCIVQQKVLYPFRKQVGGSILAAKLAKERGWAINVGGGFHHCSANKGGGFCAYADISLCIHFAFIRLNISRVMIIDLDAHQGNGHETDFAGERRVYILDIYNPNIYPFDYTARRYIDQKVEVESGTSTNEYLQKLDDALEFAGHMFHPELVVYNAGTDILDGDPLGRLRVSPDGIIKRDEKVFA

Click here to download the sequence:
Link to NCBI Protein BLAST