Transcript Information: S_Transcript_221100.p1


Annotated TAIR IDAT2G03670.1
Annotated Gene Namecell division cycle 48B
Annotated Gene Symbol(s)CDC48B
Annotation TypeOrtholog
Chromosome Positionchr2:1117595-1120361 | Forward length=603
E-Value1.8E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7169678216246
Replicate 22.8468115558084
Replicate 30.89239045565809
Condition 2: 8 Hour
Replicate 12.0637474500451
Replicate 21.2629269393394
Replicate 31.3752159745149
Condition 3: 24 Hour
Replicate 10.70467366098691
Replicate 20.91386337001401
Replicate 30.40680716782445


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_221100.p1 GENE.S_Transcript_221100~~S_Transcript_221100.p1 ORF type:5prime_partial len:124 (-),score=25.38,AAA|PF00004.25|2.1e-24,AAA_16|PF13191.2|0.00086,AAA_16|PF13191.2|0.21 S_Transcript_221100:154-525(-)
GTGGCACAACTCCTTGGTCTCCAATGGCCTCGTGGATTACTTCTCTATGGTCCTCTTGGTACTGGCAAGACGAGCTTGGTGCATGCGGTGGTCAGGGAATGTGATGCCAAGCTAACAATTATTAGTCCACATACTGTCCACAGAGCACATGTTGGAGGAAGTGAGAAAGCCCTCCGTCAAGCATTTTCAGAGGCATCATCCCATGCATTGTCAGGCAAGCCTTCAGTTGTCTTTATTGATGAGATTGATGCCGTCTGTCCTCGTTGTGATTCGAGAAGAGAACAAGAAGCTCGTTTGACCTCTCAGTTGCTTACACTAATGGATTCAAATAGGTCTTCAACAACCGCTCCACATTTTGTTGTTGTGGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_221100.p1 GENE.S_Transcript_221100~~S_Transcript_221100.p1 ORF type:5prime_partial len:124 (-),score=25.38,AAA|PF00004.25|2.1e-24,AAA_16|PF13191.2|0.00086,AAA_16|PF13191.2|0.21 S_Transcript_221100:154-525(-)
VAQLLGLQWPRGLLLYGPLGTGKTSLVHAVVRECDAKLTIISPHTVHRAHVGGSEKALRQAFSEASSHALSGKPSVVFIDEIDAVCPRCDSRREQEARLTSQLLTLMDSNRSSTTAPHFVVVA*

Click here to download the sequence:
Link to NCBI Protein BLAST