Transcript Information: S_Transcript_221256.p1


Annotated TAIR IDAT2G17695.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7684214-7685009 | Reverse length=205
E-Value9E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36707587910594
Replicate 20.45647150808651
Replicate 30.12719128333518
Condition 2: 8 Hour
Replicate 11.6177882309549
Replicate 20.92573166785076
Replicate 31.1760467644128
Condition 3: 24 Hour
Replicate 11.3558893201058
Replicate 21.0941150416168
Replicate 30.52183540148516


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_221256.p1 GENE.S_Transcript_221256~~S_Transcript_221256.p1 ORF type:internal len:145 (+),score=0.60 S_Transcript_221256:2-433(+)
CTCAATCATGCTCGAATTAAGCTTGGTTCTGGGATAGACATATATGAGAAAGCAAAGAATGCACTTCAAAATTGGAGGTACGTACGTATGTGTTTATACATACATATAGCCATATGCATTTGTAAAACACAAAAAAATACTCCCTTCGTCACTTCTTATGTTTCCATAATTAAGGAAAATAACACAGAAATTAAGTACTCAATATCTGATGGGTACTACCTCCTGATGAATCCTGAAATTAAAATAAGGGGCACACCGACTTGGTTATATCGGGGAATGCTTTTTATGAATCCATGTCATGTTGTGTTCGGCGATGCGCTTGCACACATATCGACTCTGTTCTTTTTTTTCCTCTCTCTTTGTAATACCCCAAGATTTGATGGCTGGAAAGTGATTAAATGGCTTGATGTTATTACTTATATCACCAGCATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_221256.p1 GENE.S_Transcript_221256~~S_Transcript_221256.p1 ORF type:internal len:145 (+),score=0.60 S_Transcript_221256:2-433(+)
LNHARIKLGSGIDIYEKAKNALQNWRYVRMCLYIHIAICICKTQKNTPFVTSYVSIIKENNTEIKYSISDGYYLLMNPEIKIRGTPTWLYRGMLFMNPCHVVFGDALAHISTLFFFFLSLCNTPRFDGWKVIKWLDVITYITSM

Click here to download the sequence:
Link to NCBI Protein BLAST