Transcript Information: S_Transcript_221289.p1


Annotated TAIR IDAT1G08550.1
Annotated Gene Namenon-photochemical quenching 1
Annotated Gene Symbol(s)NPQ1, AVDE1
Annotation TypeHomolog
Chromosome Positionchr1:2707462-2709387 | Forward length=462
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.628348040901
Replicate 24.6044082554814
Replicate 33.6885472167201
Condition 2: 8 Hour
Replicate 12.5961344733901
Replicate 22.1399159568434
Replicate 32.0389071622156
Condition 3: 24 Hour
Replicate 12.6593771205941
Replicate 23.1532259584483
Replicate 33.728476129452


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_221289.p1 GENE.S_Transcript_221289~~S_Transcript_221289.p1 ORF type:5prime_partial len:115 (+),score=13.86 S_Transcript_221289:3-347(+)
CCAAAGTCCAGAAATTTGAGATGGATTTCATGTGGACTGGAGGTGAATACCTCAGAGATTGCCTCCAATCTTGTCGCATCTGAGGTACTTATTGCTATACAAATTGTATATTTTGGTCTCATTGGCTTGGTAAAGCAATTTGCGGTTCCTATTGGTATCGTGTTTGATCTTTGTCAGAAGTGGAGACCATTTAAGTTGCAGCTTCTGAAAGTGACGGCTGCCGTGGCATGCACCTTTTTGGTCATGTCTTCTGCAGAAGCTGTTGACGCCCTTAAAACATGTACTTGCTTATTGAAGGAGTGCAGGTATTCATTTCAAACGTTATATAGTGCATTTCAAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_221289.p1 GENE.S_Transcript_221289~~S_Transcript_221289.p1 ORF type:5prime_partial len:115 (+),score=13.86 S_Transcript_221289:3-347(+)
PKSRNLRWISCGLEVNTSEIASNLVASEVLIAIQIVYFGLIGLVKQFAVPIGIVFDLCQKWRPFKLQLLKVTAAVACTFLVMSSAEAVDALKTCTCLLKECRYSFQTLYSAFQV*

Click here to download the sequence:
Link to NCBI Protein BLAST