Transcript Information: S_Transcript_221414.p1


Annotated TAIR IDAT5G12190.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3940731-3941105 | Reverse length=124
E-Value1.3E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.313405485143
Replicate 232.245615507137
Replicate 320.038742090835
Condition 2: 8 Hour
Replicate 134.038603775424
Replicate 235.493798322643
Replicate 335.048172504344
Condition 3: 24 Hour
Replicate 116.593709574586
Replicate 226.150551818862
Replicate 323.766926458667


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_221414.p1 GENE.S_Transcript_221414~~S_Transcript_221414.p1 ORF type:5prime_partial len:104 (-),score=18.50,RRM_1|PF00076.18|58,RRM_1|PF00076.18|1.7e-05,RRM_1|PF00076.18|1.5e+03 S_Transcript_221414:275-586(-)
ATCTACGATGCTAAGACAGCTGTTGACCATCTCTCTGGCTTCAATGTCGCTAATCGCTACTTGATTGTCTTGTATTATCAACCTGCTAAGATGAACAAAGACACTCGAGGGACAGCATTTGTGGTGTACGAGGATATCTACGATGCTAAGACAGCTGTCGACCATCTATCTGGCTTCAATGTCGCTAATCGCTACTTGATTGTCTTGTATTATCAACCTGCTAAGATGAACAAGAAGATCGACCAGAAAAAGAAGGAGGATGAGATCACTAAGTTGCAGGAAAAATATGGTGTCTCCACTAAAGATAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_221414.p1 GENE.S_Transcript_221414~~S_Transcript_221414.p1 ORF type:5prime_partial len:104 (-),score=18.50,RRM_1|PF00076.18|58,RRM_1|PF00076.18|1.7e-05,RRM_1|PF00076.18|1.5e+03 S_Transcript_221414:275-586(-)
IYDAKTAVDHLSGFNVANRYLIVLYYQPAKMNKDTRGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQPAKMNKKIDQKKKEDEITKLQEKYGVSTKDK*

Click here to download the sequence:
Link to NCBI Protein BLAST