Transcript Information: S_Transcript_221458.p1


Annotated TAIR IDAT3G15110.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5084394-5085823 | Reverse length=266
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.246690833888
Replicate 28.2003288620852
Replicate 39.1397630148817
Condition 2: 8 Hour
Replicate 110.56833502442
Replicate 28.5131813407809
Replicate 37.9227044195506
Condition 3: 24 Hour
Replicate 18.3126547796066
Replicate 29.6271058023422
Replicate 38.7049533787569


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_221458.p1 GENE.S_Transcript_221458~~S_Transcript_221458.p1 ORF type:5prime_partial len:113 (+),score=12.07,DUF3082|PF11282.4|2.1e-14 S_Transcript_221458:1-339(+)
CGTCAGATTACCGTAACGATAAGGTACAATGACTTCTCTCTTCTTTTAAATAAAAAAAAATATGTTTCAAAGGACCTTACTCAGCATTATTCTTCAACCTACTTCCCTCTTATGTGCAGGACTATTATCAATGGATTGTGTTACCTTGCAACATTTGTATTTGGAATCAATTCTGTTGGCTTATTCCTTTATTCAGGGCAGCTTGCCCTGAACTCTCTTTCTGATGGTTCTCTGGATAGTGGTACGAAACCCAAAGATGAAAAGGAGCCCAGTTCCTTGAATCAGTCTTCTGAAAACTCAGATACCAGAGAAACTAGCGACACTGATCAAACTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_221458.p1 GENE.S_Transcript_221458~~S_Transcript_221458.p1 ORF type:5prime_partial len:113 (+),score=12.07,DUF3082|PF11282.4|2.1e-14 S_Transcript_221458:1-339(+)
RQITVTIRYNDFSLLLNKKKYVSKDLTQHYSSTYFPLMCRTIINGLCYLATFVFGINSVGLFLYSGQLALNSLSDGSLDSGTKPKDEKEPSSLNQSSENSDTRETSDTDQTS*

Click here to download the sequence:
Link to NCBI Protein BLAST