Transcript Information: S_Transcript_221460.p2


Annotated TAIR IDAT3G15110.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5084394-5085823 | Reverse length=266
E-Value4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.062108623444
Replicate 226.305633703191
Replicate 328.940908931189
Condition 2: 8 Hour
Replicate 136.74528793106
Replicate 235.967048966945
Replicate 332.137739465972
Condition 3: 24 Hour
Replicate 133.775550627765
Replicate 224.930192733982
Replicate 328.908343202787


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_221460.p2 GENE.S_Transcript_221460~~S_Transcript_221460.p2 ORF type:complete len:130 (+),score=18.76 S_Transcript_221460:267-656(+)
ATGTTGCAATCTCTACACCAGTCTTTGTTCCCTCCATGTTCCTTCCTTTCTCATTCACATCCCCTCCTTAAACCCTCACTTTCACCTTCCCTTACTTCACTTTACAAACCCACTTCACCCCAAATTCTTTCTTGCCATCTTCACACCAATTCCCAACCATTGTTAACTTTGGCCGATTCTCAGCTCCCAGAAAATGAGGGTCCCATTGAGATTTCCCCTGAATTTCCTTCCATTTTTGCCACCAATGACAATCCTACCCCTCTTCAGGTCTCTACTAGTGTTCTTCTTACTGGGGCTATTACTGTCTTTCTCTTCCGTTCCATTCGTCGCAGAGCTAAACGTGCCAACGAACTGGTAGGGACTGGTGGATTATGTTGCATTACTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_221460.p2 GENE.S_Transcript_221460~~S_Transcript_221460.p2 ORF type:complete len:130 (+),score=18.76 S_Transcript_221460:267-656(+)
MLQSLHQSLFPPCSFLSHSHPLLKPSLSPSLTSLYKPTSPQILSCHLHTNSQPLLTLADSQLPENEGPIEISPEFPSIFATNDNPTPLQVSTSVLLTGAITVFLFRSIRRRAKRANELVGTGGLCCITC*

Click here to download the sequence:
Link to NCBI Protein BLAST