Transcript Information: S_Transcript_221461.p1


Annotated TAIR IDAT3G15110.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5084394-5085823 | Reverse length=266
E-Value6.2E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1634509747508
Replicate 211.152618897205
Replicate 313.578717775838
Condition 2: 8 Hour
Replicate 111.482902478456
Replicate 214.668721269271
Replicate 312.80512456856
Condition 3: 24 Hour
Replicate 110.562361248199
Replicate 210.875308851654
Replicate 312.564827982036


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_221461.p1 GENE.S_Transcript_221461~~S_Transcript_221461.p1 ORF type:complete len:273 (+),score=36.90,DUF3082|PF11282.4|1.4e+03,DUF3082|PF11282.4|3.4e-32 S_Transcript_221461:267-1085(+)
ATGTTGCAATCTCTACACCAGTCTTTGTTCCCTCCATGTTCCTTCCTTTCTCATTCACATCCCCTCCTTAAACCCTCACTTTCACCTTCCCTTACTTCACTTTACAAACCCACTTCACCCCAAATTCTTTCTTGCCATCTTCACACCAATTCCCAACCATTGTTAACTTTGGCCGATTCTCAGCTCCCAGAAAATGAGGGTCCCATTGAGATTTCCCCTGAATTTCCTTCCATTTTTGCCACCAATGACAATCCTACCCCTCTTCAGGTCTCTACTAGTGTTCTTCTTACTGGGGCTATTACTGTCTTTCTCTTCCGTTCCATTCGTCGCAGAGCTAAACGTGCCAACGAACTGAGAATGTGGTCCTCAGGTGCAAAGAAAACATTGAAAGATGAGGCATTGGATAGTTTAAAAGCGATGGGAACCGTCTCTATTCAACCTAAAACGGCACCATCACCTGTTCAGGCTTTGTTAGGGGGACTGACAGCGGGTGTGATTGCACTTATTTTGTATAAGTTTACGACTACTATTGAAGCAGCTCTAAATCGGCAAACTCTGTCTGACAGTTACTCGGTTCGTCAGATTACCGTAACAATAAGGACTATTATCAATGGATTGTGTTACCTTGCAACATTTGTATTTGGAATCAATTCTGTTGGCTTATTCCTTTATTCAGGGCAGCTTGCCCTTAACTCTCTTTCTGATGGTTCAACAGATAGTGTTATGAAACCCAAAGATGAAAAGGAGCCCAGTTCCTTGAATCAGTCTTCTGAAAACTCAGATACCAGAGAAACTAGCGACACTGATCAAACTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_221461.p1 GENE.S_Transcript_221461~~S_Transcript_221461.p1 ORF type:complete len:273 (+),score=36.90,DUF3082|PF11282.4|1.4e+03,DUF3082|PF11282.4|3.4e-32 S_Transcript_221461:267-1085(+)
MLQSLHQSLFPPCSFLSHSHPLLKPSLSPSLTSLYKPTSPQILSCHLHTNSQPLLTLADSQLPENEGPIEISPEFPSIFATNDNPTPLQVSTSVLLTGAITVFLFRSIRRRAKRANELRMWSSGAKKTLKDEALDSLKAMGTVSIQPKTAPSPVQALLGGLTAGVIALILYKFTTTIEAALNRQTLSDSYSVRQITVTIRTIINGLCYLATFVFGINSVGLFLYSGQLALNSLSDGSTDSVMKPKDEKEPSSLNQSSENSDTRETSDTDQTS*

Click here to download the sequence:
Link to NCBI Protein BLAST