Transcript Information: S_Transcript_221466.p1


Annotated TAIR IDAT3G15110.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5084394-5085823 | Reverse length=266
E-Value7E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.473868796006
Replicate 213.211251232045
Replicate 311.2644256319
Condition 2: 8 Hour
Replicate 113.408179540712
Replicate 214.468021874793
Replicate 315.954975752231
Condition 3: 24 Hour
Replicate 18.7641149333522
Replicate 213.43543320993
Replicate 311.025205039362


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_221466.p1 GENE.S_Transcript_221466~~S_Transcript_221466.p1 ORF type:5prime_partial len:167 (-),score=21.63,DUF3082|PF11282.4|1.2e-32 S_Transcript_221466:257-757(-)
TCCATTCGTCGCAGAGCTAAACGTGCCAAGGAACTGAGAATGAGGTCCTCAGGTGCAAAGAAAACATTGAAAGACGAGGCATTGGATAGTTTAAAAGTGATGGGAACCGTCTCTATTCAACCTAAAGCGCCGCCATCTCCTGTTCAGGCATTGTTAGGGGGACTGACAGCGGGTGTGATTGCACTTATTTTGTATAAGTTTACGACTACTATTGAAGCAGCTCTAAATCGGCAAACTCTGTCTGACAGTTACTCGGTTCGTCAGATTACCGTAACAATAAGGACTATTATCAATGGATTGTGTTACCTTGCAACATTTGTATTTGGAATCAATTCTGTTGGCTTATTCCTTTATTCAGGGCAGCTTGCCCTGAACTCTCTTTCTGATGGTTCTCCGGATAGTGGTACGAAACTCAAAGATGAAAAGGAGCCCAGTTCCTTGAATCAGTCTTCTGAAAACTCAGATACCAGAGAAACTCGCGACACTGATCAAACTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_221466.p1 GENE.S_Transcript_221466~~S_Transcript_221466.p1 ORF type:5prime_partial len:167 (-),score=21.63,DUF3082|PF11282.4|1.2e-32 S_Transcript_221466:257-757(-)
SIRRRAKRAKELRMRSSGAKKTLKDEALDSLKVMGTVSIQPKAPPSPVQALLGGLTAGVIALILYKFTTTIEAALNRQTLSDSYSVRQITVTIRTIINGLCYLATFVFGINSVGLFLYSGQLALNSLSDGSPDSGTKLKDEKEPSSLNQSSENSDTRETRDTDQTS*

Click here to download the sequence:
Link to NCBI Protein BLAST