Transcript Information: S_Transcript_221623.p1


Annotated TAIR IDAT1G74040.1
Annotated Gene Name2-isopropylmalate synthase 1
Annotated Gene Symbol(s)IMS1, MAML-3, IPMS2
Annotation TypeOrtholog
Chromosome Positionchr1:27842258-27845566 | Forward length=631
E-Value4.3E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27578239621949
Replicate 20
Replicate 30.38223287219898
Condition 2: 8 Hour
Replicate 10.33148275104352
Replicate 20
Replicate 30.99400325619084
Condition 3: 24 Hour
Replicate 10
Replicate 20.35228722657535
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_221623.p1 GENE.S_Transcript_221623~~S_Transcript_221623.p1 ORF type:5prime_partial len:193 (-),score=38.24,HMGL-like|PF00682.15|8.1e-56 S_Transcript_221623:71-649(-)
GCCAGGGTGACTTTGGTCATTCCAACTAGCAAAGTTCATATGCAATACAAGTTGAAGAAAAGTGAAGAGGATGTCATGAGGATTGTGAAAAATGTGTTGGCTTATGCAAGGAGCTTAGGAGTTCAAGATATTCAGCTCATTGCTGAAGATGCTGGCAGGGCGGATAGAAAATTTCTTTACGAATTGGTGGAAGAAGCGATCAAAGGAGGAACAACAACAATAGATCTAGCGGACACAGTAGGCTACAGATATCCTCATGAATGGGGCCAATTCTTCCAAGAGATCAAGCTAAGCATTCCTGGTATTGATAATGTTGTCTTGGCTACACATTGCCATGACGATCTTGGCCTTGCCACTGCCAATACATTAGCAGCTGTGTTTGCAGGTGCACGACAAGTTGAGGTGACCGTTAATGGCATCGGAGAAAGGGCAGGCAATGCTTGTTTGGAAGAAGTTGTGATGGCACTAAAATGCAGAGGTGATCTTGGAGGACTTTACACTGGAATCGATACAAAACAAATTTACCCAACCAGCAAGATGGTAACTATAAAGCTTTTCTACTTTATATTAGTTCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_221623.p1 GENE.S_Transcript_221623~~S_Transcript_221623.p1 ORF type:5prime_partial len:193 (-),score=38.24,HMGL-like|PF00682.15|8.1e-56 S_Transcript_221623:71-649(-)
ARVTLVIPTSKVHMQYKLKKSEEDVMRIVKNVLAYARSLGVQDIQLIAEDAGRADRKFLYELVEEAIKGGTTTIDLADTVGYRYPHEWGQFFQEIKLSIPGIDNVVLATHCHDDLGLATANTLAAVFAGARQVEVTVNGIGERAGNACLEEVVMALKCRGDLGGLYTGIDTKQIYPTSKMVTIKLFYFILVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST