Transcript Information: S_Transcript_22166.p1


Annotated TAIR IDAT4G29950.1
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14657464-14660370 | Forward length=828
E-Value5.2E-249
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.379706927094
Replicate 219.688438565231
Replicate 318.955653773955
Condition 2: 8 Hour
Replicate 121.351176762498
Replicate 220.370014541371
Replicate 321.805570826861
Condition 3: 24 Hour
Replicate 119.810958425569
Replicate 216.716958961997
Replicate 316.896024909836


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22166.p1 GENE.S_Transcript_22166~~S_Transcript_22166.p1 ORF type:complete len:827 (+),score=191.89,RabGAP-TBC|PF00566.14|3.4e-12,RabGAP-TBC|PF00566.14|4.5e-13,RabGAP-TBC|PF00566.14|9.4e+02 S_Transcript_22166:396-2876(+)
ATGTCACCAGCTGCATTTTTGCCAGAGAAGTTGGATTGTATAAAGGGTCTTAATTATAGTAATAATAATATCAATGATATGGTGATGGATGATCCTCGTTTCCCCGATCTTAGAGGTGTTCGATGGCGGGTCAATCTTGGGGTTCTTCCTTCTTCTTCCATTGATGACCTTCGTCGTGTTACTGCTGATTTTCGTCGAAAATATGCTGGTCTACGGAGGTGCCTTCTCATTGATCCACATGTCCCTAAATTCAGTGATGATTCTCCAGATCTAGAAATAGATAACCCGCTCTCCCAAAATCCAGATAGCACATGGGGCCGCTTTTTCCGAAATGCTGAGTTGGAAAAAATGGTCGACCAAGATTTATCTCGTTTATATCCTGAACACGGGAGCTATTTCCAGACACCAGGATGCCAAGGCTTATTGAGGCGAATTTTGTTATTATGGTGCCTGAGGCATCCAGAGTGTGGCTACAGACAAGGAATGCATGAACTTCTGGCTCCTCTGTTATACGTCCTTCATGCTGACATACAACATCTTAATGAAGTTCGAAAGCGTTATGAAGACCACTTCGTGGACAAGTTTGATGAGGTTTTGTTTCAGGAAAGCCTTGATTTCAGTTTCAAGATATCTTCAAATGCTTTAGAAGATGATACTGGCTTTCAAGAGCAGTCTAGAAAGCATACAAGTCTTAGTGATCTTGATGCCAACATACAGAATATTGTTTTACTAACTGATTTATATGGGGCAGAGGGTGAACTTGGCATTGTATTATCTGAGAAGTTTATAGAACATGATGCATATTGTATGTTTGATGCTTTAATGAGTGGGGCTGGTGGTGTTGTGGCCATGGCAGAATTCTTCTCCCACTCATCTGCAAGTGCTACCCAAAGTGGTTTAGCCCCTGCTATTGAAGCTTCGTTGGCATTTTACCACTTGCTTTCTGTTGTTGATCCCTCATTGTATAGTCATCTTGTTGAACTGGGTGTTGAACCACAATATTTCGCTCTTCGTTGGTTGCGGGTCCTCTTTGGCCGTGAATTTTCTCTTGAAGACTTGTTGATAATCTGGGATGAGATGTTTTCATTTGATAATAGTAAACCGATTAAAGCTGCTGAACATGATCCGGGGGTATTACATTCTCCAAGGGGAGCATTCATCACTGCCATGGCTGTTTCAATGATGCTCAATGTGAGGTCTTCTCTGCTTGCCACCGAATATGCTGCCGCTTGTCTGCAGAGACTACTCAATTATCCTGAAAATGTAGATTTGGACAAACTGATAGGAAAGGCAAAGTCTTTGGTTACTCTTGCACTGGAGACGAATGCTCCTTCCCATTCTACTTCAGTGATTGGGCATGGCAACCACAACAAGCAAATGGTTGGTAAAGGTCATAGTCACAGCATCTCATTTGATTCAAGTTCTCAAGGAACACCATTGAATATTGTACCTGAGAGATATTGGGAAGAAAAATGGAGAGTTATGCACAAGGAAGAGGAAACTAAGAAGGAAAATTTTCCTAAAAACGGATCATCTCGGAGGAAAGGTTGGACAGAGAGAGTGAAGTTGAGATTATCTAGAACAGAATCAGACCCTTCCCCATCAAAAAGAGAACACAAGGTGAGAGATCATAAACCATGTGTTAGGAGAATCTTGCTCGATGATTTGTCCCGGCAGCTTAACTGTGAAGAAGATACTGCAGAAGCTGATCATGACAAATCTTCTACACATGAGGATCCCCTATTGATGGAATCTGATGCAGTGTCTCAAGATGTTGTGCAGGAAAGTGTAGATTATGTAGACAAGATATCTCCAGCCCCAAGTACTGCCAGTGAAGAGCATTCTCCTGTTTTTTCTGACCCACCAAGTCCTGTTGAAAATGATTCGGAGAAGAGTAGCGTTGCATCAAATGCATCCCATGATATTGATGATGTAACCCAGAACTCTGGTTCGTTTGAGTCTACAATAGAAGAGCCTCCCCTTCCCATTTCTGATGCTCCAAAAGCAAGTGCTTGTGAAGTATCTGACACTGGCAATAATAGTCCTAGAGAATTACCAGCAGCTGTTCCGAAGGAAAGAAAGACTTTATCTGGTAAACTCCAGTGGTTCTGGAAGGTTGGGCGCCATGCTTCTGGTGAGGGGACTTCTGATAAAAAGTCTGAGGTTGATGACGCAAAATTGGCCAATGGCGGATGTCTTCAAGGGGATAAGGGGGGACATTCTACTGATGAGACGAACTTCAGCCTTGTAAATATCAAAACAGATGGCTGTGACCAGAATTTGATATGTGCATTGAGGAATCTTGGGCAGTCTATGCTGGAAAACATTCAGGTCATCGAGTCATCATTCCAGCAAGAAAAAAGTCAATCTGGCTCGCTCGATCACATTTCAAAGCATGCCCTTGTTGAAAAGGGGCAAGTTAAAGCAATGATGGCCCTGAAGGAGCTTCGGAAAATAAGCAGCCTTCTAAGAGAGATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22166.p1 GENE.S_Transcript_22166~~S_Transcript_22166.p1 ORF type:complete len:827 (+),score=191.89,RabGAP-TBC|PF00566.14|3.4e-12,RabGAP-TBC|PF00566.14|4.5e-13,RabGAP-TBC|PF00566.14|9.4e+02 S_Transcript_22166:396-2876(+)
MSPAAFLPEKLDCIKGLNYSNNNINDMVMDDPRFPDLRGVRWRVNLGVLPSSSIDDLRRVTADFRRKYAGLRRCLLIDPHVPKFSDDSPDLEIDNPLSQNPDSTWGRFFRNAELEKMVDQDLSRLYPEHGSYFQTPGCQGLLRRILLLWCLRHPECGYRQGMHELLAPLLYVLHADIQHLNEVRKRYEDHFVDKFDEVLFQESLDFSFKISSNALEDDTGFQEQSRKHTSLSDLDANIQNIVLLTDLYGAEGELGIVLSEKFIEHDAYCMFDALMSGAGGVVAMAEFFSHSSASATQSGLAPAIEASLAFYHLLSVVDPSLYSHLVELGVEPQYFALRWLRVLFGREFSLEDLLIIWDEMFSFDNSKPIKAAEHDPGVLHSPRGAFITAMAVSMMLNVRSSLLATEYAAACLQRLLNYPENVDLDKLIGKAKSLVTLALETNAPSHSTSVIGHGNHNKQMVGKGHSHSISFDSSSQGTPLNIVPERYWEEKWRVMHKEEETKKENFPKNGSSRRKGWTERVKLRLSRTESDPSPSKREHKVRDHKPCVRRILLDDLSRQLNCEEDTAEADHDKSSTHEDPLLMESDAVSQDVVQESVDYVDKISPAPSTASEEHSPVFSDPPSPVENDSEKSSVASNASHDIDDVTQNSGSFESTIEEPPLPISDAPKASACEVSDTGNNSPRELPAAVPKERKTLSGKLQWFWKVGRHASGEGTSDKKSEVDDAKLANGGCLQGDKGGHSTDETNFSLVNIKTDGCDQNLICALRNLGQSMLENIQVIESSFQQEKSQSGSLDHISKHALVEKGQVKAMMALKELRKISSLLREM*

Click here to download the sequence:
Link to NCBI Protein BLAST