Transcript Information: S_Transcript_22170.p1


Annotated TAIR IDAT5G14170.1
Annotated Gene NameSWIB/MDM2 domain superfamily protein
Annotated Gene Symbol(s)CHC1
Annotation TypeOrtholog
Chromosome Positionchr5:4568696-4570444 | Reverse length=534
E-Value1.1E-270
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.711204191768
Replicate 228.331552642122
Replicate 328.684919775785
Condition 2: 8 Hour
Replicate 127.345288321785
Replicate 227.118643092805
Replicate 325.720598401583
Condition 3: 24 Hour
Replicate 131.356677778012
Replicate 228.308856895179
Replicate 324.942833581443


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22170.p1 GENE.S_Transcript_22170~~S_Transcript_22170.p1 ORF type:complete len:542 (+),score=131.86,SWIB|PF02201.14|9.1e-24 S_Transcript_22170:543-2168(+)
ATGTCAGCAAATAACAGTAATACTAATCAGGCCAAGAACATAGTAGGGTCTTCATTTGGAAATACTGGAATGGTGAACCCTAATTTACCCCCAAATTTTTCCCAAGCTCAAGGTCAAGGTCAACCTCAACCACATTTAGGGTTTAACTTTCAGCTGGCCCAAGCCCATGCCCTTGCACAGGCCCAATCCAAAGCCCAAGCTGCAGCTGCTCATGCTCAGCTTTTGCAGGCTCAGGGTTTGTCCCTTAATCAGTCCCAAGCAATGGGGATTGCTAATTTGGGGACATCTTCGCCTTCGATTTCAGGGTTGAGTGCCAAAAGGGTTCCTCAAAAGCCCCCTGTTCGGCCTCCTGGAGGTCCTTCACTTGGTGGTGGTGGTGGTGTTCATATGATGTCGTCCCCTTCACCTATGAAGAGTGCAATGGAGCTTACCCCGGCTTCTGCTCGTAGGAAGAAACAGAAACCACCAGAAAAGCAGTTGAGTGAGAGAGTGGCTGCTATATTGCCTGAATCTGCTTTGTATACGCAGCTACTTGAGTTTGAGTCTAGGGTTGATGCTGCTTTGGCTAGAAAGAAGATTGACATTCAAGAGGCTTTGAAAAACCCTCCTTGTGTTCAGAAAACTCTTAGGATTTATGTGTTCAATACGTTTGCAAATCAGAGTCAGTCTATTCCTAAGAAGCCTAATGCCGAGCCCCCTACTTGGACACTTAAGATCATAGGGAGGATCTTGGAAGAGGGTATGGATCCTGAACAGGTTGCTAATATGAAGCCTAACCCAATGTACCCGAAGTTCTCTTCGTTTTTCAAGAGAGTCACGATTGTGTTGGATCAGAGATTGTATCCGGAGAACCATTTGATAGTGTGGGAGAATTCGAGAGCATCTGCTCCTCAGGAGGGGTTTGAGGTCAAGAGGAAGGGGGACAAGGAGTTTACAGCGAACATTCGGTTTGATATGAACTATTTGCCTGAGAAATTCAAGCTTTCGCCTGCTTTGACTGAACTTCTTGGCATAGAAGCTGAGACTCGCCCTAGAATTATTGCTGCAATCTGGCATTATGTGAAGGCTCGAAAGTTGCAGAACCCAAATGACCCAACCTTCTTCAATTGCGACCCTCAGCTTCAGAAGGTTTTTGGGGAAGATAAGATGAAGTTTACCATGGTGTCTCAGAAGATATCGCAGCATTTAACCCCTCCTCCGCCTATACAAGTGGAGCATCACATCAAACTTTCAGGAAATAGCCCTGCTGGTGATGCTTGTTACGATATAATGGTAGATATACCTTTCCCCATACAGAGAGAACTCTCTATGCTATTGGCAAATACTGAAAAGAACAAGGAGATTGAGGCCTGTGATGAAGCAATATGTGGGGCTATAAGGAAGATTCATGAGCATCGCAGAAGAAGAGCGTTCTTTCTTGGTTTTAGTCAGTCACCTGTGGAATTCATCAATGCATTGATAGAATCTCAAAGCAGAGACTTGAAACTTGTGTCAGGGGAACCTGGTCGCAGTGCAGAAAGAGAACGCCGATCAGATTTCTTTAACCAGCCCTGGGTTGAGGATGCAGTTATTCGTTATTTAACACGCAAGCCAGCTAATGGAACTGACGCTCCTGGAAGCACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22170.p1 GENE.S_Transcript_22170~~S_Transcript_22170.p1 ORF type:complete len:542 (+),score=131.86,SWIB|PF02201.14|9.1e-24 S_Transcript_22170:543-2168(+)
MSANNSNTNQAKNIVGSSFGNTGMVNPNLPPNFSQAQGQGQPQPHLGFNFQLAQAHALAQAQSKAQAAAAHAQLLQAQGLSLNQSQAMGIANLGTSSPSISGLSAKRVPQKPPVRPPGGPSLGGGGGVHMMSSPSPMKSAMELTPASARRKKQKPPEKQLSERVAAILPESALYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYVFNTFANQSQSIPKKPNAEPPTWTLKIIGRILEEGMDPEQVANMKPNPMYPKFSSFFKRVTIVLDQRLYPENHLIVWENSRASAPQEGFEVKRKGDKEFTANIRFDMNYLPEKFKLSPALTELLGIEAETRPRIIAAIWHYVKARKLQNPNDPTFFNCDPQLQKVFGEDKMKFTMVSQKISQHLTPPPPIQVEHHIKLSGNSPAGDACYDIMVDIPFPIQRELSMLLANTEKNKEIEACDEAICGAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLVSGEPGRSAERERRSDFFNQPWVEDAVIRYLTRKPANGTDAPGST*

Click here to download the sequence:
Link to NCBI Protein BLAST