Transcript Information: S_Transcript_2218.p1


Annotated TAIR IDAT1G15740.1
Annotated Gene NameLeucine-rich repeat family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5411509-5414544 | Forward length=585
E-Value7.4E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.907147146188
Replicate 217.650231646012
Replicate 315.524930076344
Condition 2: 8 Hour
Replicate 147.106832342324
Replicate 248.216342441441
Replicate 347.594788085152
Condition 3: 24 Hour
Replicate 121.323214631117
Replicate 218.266355598847
Replicate 321.08111174159


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2218.p1 GENE.S_Transcript_2218~~S_Transcript_2218.p1 ORF type:complete len:335 (+),score=62.03,LRR_8|PF13855.2|3e-06,LRR_8|PF13855.2|1.1e-07,LRR_8|PF13855.2|1.9e-05,LRR_8|PF13855.2|2.2e-06,LRR_8|PF13855.2|6.9e-09,LRR_8|PF13855.2|0.016,LRR_4|PF12799.3|0.013,LRR_4|PF12799.3|0.058,LRR_4|PF12799.3|0.0015,LRR_4|PF12799.3|0.0001,LRR_4|PF12799.3|0.0026,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.002,LRR_6|PF13516.2|7.7,LRR_6|PF13516.2|8e+03,LRR_6|PF13516.2|3.3e+03,LRR_6|PF13516.2|81,LRR_6|PF13516.2|0.08,LRR_6|PF13516.2|9.4e+02,LRR_6|PF13516.2|64,LRR_6|PF13516.2|6.7,LRR_6|PF13516.2|1.4e+02,LRR_6|PF13516.2|11,LRR_6|PF13516.2|5.6e+02,LRR_6|PF13516.2|33,LRR_1|PF00560.29|7.1e+03,LRR_1|PF00560.29|35,LRR_1|PF00560.29|14,LRR_1|PF00560.29|26,LRR_1|PF00560.29|0.65,LRR_1|PF00560.29|3.7e+02,LRR_1|PF00560.29|7e+02,LRR_1|PF00560.29|2.1e+02,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|4.4e+03,LRR_1|PF00560.29|37 S_Transcript_2218:1361-2365(+)
ATGGATTCAGATATGGAGCTATCTGGGCTTACAAATTTGAAAGCATTACAAATTTCCTGCAGCAGGGTTACAGATGATGGCATTTCATACTTAGAAGGTTTGCGCAAGCTTGTTTTATTGAATCTGGAGGGTTGCCCCATTACTGCTGCAAGCTTGGATACACTTGCAGCACTTGGTGCATTGTTATATTTGAATCTTAGCAGGTGTAACCTGTCTGGTCCTGAATTTGAGAAGTTCTCCGGATTGAGCAACTTACAAATATTAAACTTGGGATACAGCAAAATTACAGATACATCTCTGGAATACCTGAAAGGTCTTTCGAACTTGGAGAGCTTGAACCTTGATTCTTGCAGGATTACAGATGAAGGACTATCCCACCTGTCCGGTCTCTGCCGATTGAAGTGTTTGGAGTTGTCTGATACTGCAGTGGGAAGCAGTGGACTAAAACATCTTTCTGGACTGACCAATCTGGAGAGCATAAACCTCTCGTTCACTCCAGTTACTGATGTTGGTTTAAAAAAGTTGTCTGGATTATCATCTCTTAAGTCACTCAATCTGGATTCTCGACAAATCACTGATGCTGGACTTTCTGCTCTTACAAGCTTAACTGCATTGACTCACCTGGATCTTTTTGGAGCGCACATCACAGATCTTGGAATGCAATATTTGAAAAATTTCAAAAACCTTCAATCCTTGGAAATATGCGGTGGCGGAATAACTAATGCTGGTGTGAAGTGCATCAAAGGTCTTTCATCTTTGACTTTGCTGAATCTATCACAGAATGGCAGCTTGACTGACAAATCCTTGCAATTGATTTCCGGGTTAACAGCACTGGTCTCATTGAACTTCTCAAATTCACGAGTAACCAGTGCTGGATTGCAGCATTTGAAGCCTCTAAAGAATCTGAGGTCACTTTCCTTGGAGTCCTGCAAAGTGACTGCAAATGACATTAGACGGCTTCAGTCCACAGACCTTCCCAACTTGATCAGTTTTCGCCCAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2218.p1 GENE.S_Transcript_2218~~S_Transcript_2218.p1 ORF type:complete len:335 (+),score=62.03,LRR_8|PF13855.2|3e-06,LRR_8|PF13855.2|1.1e-07,LRR_8|PF13855.2|1.9e-05,LRR_8|PF13855.2|2.2e-06,LRR_8|PF13855.2|6.9e-09,LRR_8|PF13855.2|0.016,LRR_4|PF12799.3|0.013,LRR_4|PF12799.3|0.058,LRR_4|PF12799.3|0.0015,LRR_4|PF12799.3|0.0001,LRR_4|PF12799.3|0.0026,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.002,LRR_6|PF13516.2|7.7,LRR_6|PF13516.2|8e+03,LRR_6|PF13516.2|3.3e+03,LRR_6|PF13516.2|81,LRR_6|PF13516.2|0.08,LRR_6|PF13516.2|9.4e+02,LRR_6|PF13516.2|64,LRR_6|PF13516.2|6.7,LRR_6|PF13516.2|1.4e+02,LRR_6|PF13516.2|11,LRR_6|PF13516.2|5.6e+02,LRR_6|PF13516.2|33,LRR_1|PF00560.29|7.1e+03,LRR_1|PF00560.29|35,LRR_1|PF00560.29|14,LRR_1|PF00560.29|26,LRR_1|PF00560.29|0.65,LRR_1|PF00560.29|3.7e+02,LRR_1|PF00560.29|7e+02,LRR_1|PF00560.29|2.1e+02,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|4.4e+03,LRR_1|PF00560.29|37 S_Transcript_2218:1361-2365(+)
MDSDMELSGLTNLKALQISCSRVTDDGISYLEGLRKLVLLNLEGCPITAASLDTLAALGALLYLNLSRCNLSGPEFEKFSGLSNLQILNLGYSKITDTSLEYLKGLSNLESLNLDSCRITDEGLSHLSGLCRLKCLELSDTAVGSSGLKHLSGLTNLESINLSFTPVTDVGLKKLSGLSSLKSLNLDSRQITDAGLSALTSLTALTHLDLFGAHITDLGMQYLKNFKNLQSLEICGGGITNAGVKCIKGLSSLTLLNLSQNGSLTDKSLQLISGLTALVSLNFSNSRVTSAGLQHLKPLKNLRSLSLESCKVTANDIRRLQSTDLPNLISFRPE*

Click here to download the sequence:
Link to NCBI Protein BLAST