Transcript Information: S_Transcript_221818.p1


Annotated TAIR IDAT5G48240.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19559301-19561153 | Forward length=356
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.84041056532149
Replicate 21.8579191206328
Replicate 30.3882681280758
Condition 2: 8 Hour
Replicate 12.4692557209312
Replicate 20.70647943072821
Replicate 31.5706414024723
Condition 3: 24 Hour
Replicate 13.4491921300938
Replicate 20.95426575058305
Replicate 31.0619808170575


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_221818.p1 GENE.S_Transcript_221818~~S_Transcript_221818.p1 ORF type:5prime_partial len:95 (+),score=9.66 S_Transcript_221818:2-286(+)
CCAGTACGAGGTACGGTGCCCCAGGGCCGTTTCCGTGCTTCAGAGCCCCAGGTCAATAAGGCTCAAAATGCGCAGAAAGGGTTGAATCCTTCAAGATTTAAAGACGCAAAAGCTTTGACAAAGCGGAGAAAAGAAGCCTCCCATTCAGAAGTGAGTCGGACTTCAGCACCATCAGCTGATACTACAACGAAGACATCCACACACACAGGCGGGGAAGGAAGTAAACAGGCGGGGAAGGAAGTAAACAACCTGCATGGGCTCCATTACGCGATACTTTCATCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_221818.p1 GENE.S_Transcript_221818~~S_Transcript_221818.p1 ORF type:5prime_partial len:95 (+),score=9.66 S_Transcript_221818:2-286(+)
PVRGTVPQGRFRASEPQVNKAQNAQKGLNPSRFKDAKALTKRRKEASHSEVSRTSAPSADTTTKTSTHTGGEGSKQAGKEVNNLHGLHYAILSS*

Click here to download the sequence:
Link to NCBI Protein BLAST