Transcript Information: S_Transcript_221879.p1


Annotated TAIR IDAT3G09740.1
Annotated Gene Namesyntaxin of plants 71
Annotated Gene Symbol(s)SYP71, ATSYP71
Annotation TypeOrtholog
Chromosome Positionchr3:2989615-2991354 | Forward length=266
E-Value2.3E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0519361409448
Replicate 23.8593800975245
Replicate 33.710054780666
Condition 2: 8 Hour
Replicate 17.7716437015791
Replicate 26.9137491423062
Replicate 35.2202075767301
Condition 3: 24 Hour
Replicate 19.1073420966617
Replicate 26.2771489788717
Replicate 33.5296155435731


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_221879.p1 GENE.S_Transcript_221879~~S_Transcript_221879.p1 ORF type:5prime_partial len:343 (+),score=51.21,SNARE|PF05739.15|2.4e+03,SNARE|PF05739.15|3.1e-10 S_Transcript_221879:1-1029(+)
GGAAAACAAAAACTGCCAGGAAATCAAGATTTGATGATTTATATACTTTCCCCCGTTGCTTACGTAACTCACTCTGCGTGTCTCTCGCACACCCAATTCCCCAAATTTAGTGTCGGAAACTTCCATTTGGTGTGCTTACTTTATTTTGGTCATCAACTCCTCAAACTTGTGTTTAGAAGGAGAAGGAGAAGGAGAAGAAGAAGGAGGAGGATGAGTTTGGTGGACATAAGAACAAGAGTAGACGCTATTTGCAACAAGTACGACAAGTACGATGTCGAAAAGCACCACGATAATAACAATACTAGAGACTCCAACATCTCCGGTGATGATCCCTTTGCCCGTTTTTACTCTGCTTTCCAGTCCAACATCCAAGAAACTATCCAGAAATCGGAGACAGCGGCGACGGAGAATAACAGGGCATCGGCGGTTGCTTTATATGCGGAAGTTCGACGAACTAAGTCTCGATTGCTTGAGGAACTCCCCAAACTCCACAAATTGGCTCAAAAAAAGGTGAGGGGGCTCTCAAGGGAGGATCTTGAAGCTCGTCATGACTTGGTGTCGGCCCTGAAAGATAGGATCGAGTCGATACCAGATGGTGCATCGGGTGCACCCAAGCAAACTGGTGGATGGGCATCTTCAATCTCAACCACATGGGTTAGAATTGATTCACCATCAGATGCCTGGTCTCATGCTGGATATTTTCAGCAAACTGAAGAGTCTGAGCAGTTTCGTCAGGAATATGAAATGCGGAAAATGAAGCAGGATGAAGGCTTGGATTATATTGCTGAAGGACTGGACACACTGAAAGACATGGCCCAAGCTATGAATGAGGAAATAGACAGACAAGTGCCACTAGTGGATGAAATAGACGAGAAGGCTGACCGTGCATCATCTGATCTCAAAAGTACCAACGTAAGACTAAAGGACACCGTCAACAAGCTGAGATCCAGCCGCAACTTTTGCCTTGATATTATTCTCTTGTCTATAATTTTGGGAATAGCTGCCTACATATACAATGTGTTGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_221879.p1 GENE.S_Transcript_221879~~S_Transcript_221879.p1 ORF type:5prime_partial len:343 (+),score=51.21,SNARE|PF05739.15|2.4e+03,SNARE|PF05739.15|3.1e-10 S_Transcript_221879:1-1029(+)
GKQKLPGNQDLMIYILSPVAYVTHSACLSHTQFPKFSVGNFHLVCLLYFGHQLLKLVFRRRRRRRRRRRRMSLVDIRTRVDAICNKYDKYDVEKHHDNNNTRDSNISGDDPFARFYSAFQSNIQETIQKSETAATENNRASAVALYAEVRRTKSRLLEELPKLHKLAQKKVRGLSREDLEARHDLVSALKDRIESIPDGASGAPKQTGGWASSISTTWVRIDSPSDAWSHAGYFQQTEESEQFRQEYEMRKMKQDEGLDYIAEGLDTLKDMAQAMNEEIDRQVPLVDEIDEKADRASSDLKSTNVRLKDTVNKLRSSRNFCLDIILLSIILGIAAYIYNVLK*

Click here to download the sequence:
Link to NCBI Protein BLAST