Transcript Information: S_Transcript_221988.p1


Annotated TAIR IDAT1G72440.1
Annotated Gene NameCCAAT-binding factor
Annotated Gene Symbol(s)EDA25, SWA2
Annotation TypeHomolog
Chromosome Positionchr1:27268325-27273596 | Reverse length=1043
E-Value8E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.841151028849
Replicate 20.97131777926166
Replicate 32.2038489659649
Condition 2: 8 Hour
Replicate 13.6212926953622
Replicate 22.1105517584648
Replicate 31.7428051500928
Condition 3: 24 Hour
Replicate 11.511281247777
Replicate 20.42761908634618
Replicate 30.95177526057042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_221988.p1 GENE.S_Transcript_221988~~S_Transcript_221988.p1 ORF type:complete len:159 (-),score=39.50 S_Transcript_221988:14-490(-)
ATGGCAAACACCAAACCCAAGAAAACCTCCCAATCGAAATCAAAACCCAAAGAAGACGACCTTGACAAAATCCAATCTGATGTAGCTTCATTTGCATTCTCTCTTGGTCTTGCTTCTTCTTCTCTCCCTTCTGGTTTCAATGACACTGATTTCAGACCCAAAAAGAAACCCCCCAATCAACAACAACAAAACCCTAAACCAACAACCCAGAACAAAACCAAAAACCCCACTTCCCAAAAGCCTCAATTTGAAAAACCCACTTCAAAAAAACCCTCTTTTAACAATCCCAGATACAACAAAGCCAACACCCATATCAACAACAACAATAACGATCAAGTCTTTGTTGGTAACTCCATGTCATCATTTGATAAGTTCAAGAACCTTACTAAACTTCCTTTGATTAAAGCTAGTGTCTTGGGGGCATGGCATGAGGATGAGGCTGAGCTGGAGGCCAAAGTTTTGGGGGACTCAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_221988.p1 GENE.S_Transcript_221988~~S_Transcript_221988.p1 ORF type:complete len:159 (-),score=39.50 S_Transcript_221988:14-490(-)
MANTKPKKTSQSKSKPKEDDLDKIQSDVASFAFSLGLASSSLPSGFNDTDFRPKKKPPNQQQQNPKPTTQNKTKNPTSQKPQFEKPTSKKPSFNNPRYNKANTHINNNNNDQVFVGNSMSSFDKFKNLTKLPLIKASVLGAWHEDEAELEAKVLGDSI*

Click here to download the sequence:
Link to NCBI Protein BLAST