Transcript Information: S_Transcript_222059.p1


Annotated TAIR IDAT2G15690.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:6831855-6833594 | Reverse length=579
E-Value2.9E-186
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.030534804945
Replicate 212.391429751481
Replicate 312.189890630599
Condition 2: 8 Hour
Replicate 118.25803965508
Replicate 219.920139199757
Replicate 319.4908606525
Condition 3: 24 Hour
Replicate 112.343855397082
Replicate 213.155876925311
Replicate 311.099427075539


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_222059.p1 GENE.S_Transcript_222059~~S_Transcript_222059.p1 ORF type:complete len:584 (+),score=134.96,DYW_deaminase|PF14432.2|2.1e-32,PPR_2|PF13041.2|9.3e+03,PPR_2|PF13041.2|0.074,PPR_2|PF13041.2|7.5e-05,PPR_2|PF13041.2|1.5e+02,PPR|PF01535.16|2.1e+03,PPR|PF01535.16|0.079,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|89,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|5.8e+03,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|7.5 S_Transcript_222059:104-1855(+)
ATGGCATCTCTCATAGCAGTTCGTCCTCCATCAATCTCATCTCTCTTCAAGGTTCGTTCTTTAAACCCTTCTCGCCATTTCTTCTTCTTAAACCCTAATTCCTCAAAACCCCAGTCTTCCTCTTTCAAACCTCTCTCCACCTCTGCTACTTTCCCTAACAATTACAACTATTCCCCTCAATCTAACAACCCTTCTTATCATCAAAACCCAAATCCCAATCCGGGTCATCCTAATACTAATTGGTACCCCCAAAATGGACCCCAAAACCGTAATTTCATCCCAAACAATTATCAACAACAACAACAACCCAGAAACCCTAATCAAATGGGCAACCAAAATCAAGCTTACCCACTTCATAGAAACCCTAATCAAGGATACCCACCTGGCCAATCTCCCAATCAAGGTTACCCTTTGCAGCAAAACCCTAATTTCATCCCAAACAACCAACAGCAACCCAGGACCCCCAATCAGATGGGCAACCAAAATCAAGGTTACCCACTTCATAGAAGCCCTAATCAAGGATACCCAAATGGGCAAAATCCCAATCAAGGTTACCCTTTACCTCCACCACCACCACCTCCTAGAAACAGCAATAATCAGGTTCAAAGTCAACAGGGTTTAGTTCAGGGTCAAAATGTGGATTTGATGGGCATGGCCATGGAGGGGAAAGTTAAGGATATAATTGAGTTGATGGAGAAAGGAGCTAAGGCTGATAATGGGGAGTGTTTCTTTGTGTTGTTTGATAAGTGTTCGAACCCAAAATCGCTTGACAGTGCAAAGAAGGTTCATGATTTCTTCCTTAGGTCGACCTTTCGAGGGGATGTTAGGTTGAACAACAAGGTGCTGGAAATGTATGCTAAATGTGGAAGTATGGTTGATGCACGCCGGGTGTTCGATCATATGCCTGAGAGAAATATTGAGTCTTGGCATTTGATGATTAAGGGATATGCTAGCAACTCATTAGGGGATGAGGGGTTGCAGTTGTTCGAAAAGATGAAGGGGTTAGGATTGCGACCCACTAGTGAGACGTTTGTGGCTGTTTTGGCTGCATGCTCGGGTGCTGAGGCTGTGGAAGAAGGGTTCTTGTATTTGGAGAAGATGAGGAGTGAGTATGGGATTGAGCCTCAGGTTGAGCATTACTTGGGGGTGCTTGAAGTGCTTGGTGCTTCAGGCCATCTTGTGGAGGCAAGGGAGTATATTGAGAACTTGCCAATGGGGCCGACTGTGGTGTTTTGGGAAGCTTTGAGGGATTATGCTAGGATTCATGGTGATATTGATCTTGAGGACCATATTGATGAGTTAATTGTTAGTTTCGATCCTTCAAGGGGTGTTACTAATAAAATCCCTGCTCCACCTCCGAAGAAGCGAATGGGTGTGAATATGATGGAAGGGAGGAACAGGCTTCCTGAGTTTAAGAACCCGACTCTATACAAGGATGATGAGAAATACAAGGCGGCATTGAAGGAACAAGGTTATGTGCCCGACACTAGATATGTTCTCCATGATATTGATCAGGAGGCTAAGGAGCAGGCTTTGCTGTACCATAGTGAGAGGCTGGCTATTGCTTACGGTTTGATCAGTACCCCGCCAAGAACGCCTCTTAGGATCATTAAGAACCTTCGGATTTGTGGTGACTGTCACAATGCCATCAAGATCATGTCTAAGATTGTTGGAAGGGAGTTGATTGTTAGGGACAATAAGCGGTTCCATCATTTCAAGGATGGCAAGTGCTCTTGTGGGGATTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_222059.p1 GENE.S_Transcript_222059~~S_Transcript_222059.p1 ORF type:complete len:584 (+),score=134.96,DYW_deaminase|PF14432.2|2.1e-32,PPR_2|PF13041.2|9.3e+03,PPR_2|PF13041.2|0.074,PPR_2|PF13041.2|7.5e-05,PPR_2|PF13041.2|1.5e+02,PPR|PF01535.16|2.1e+03,PPR|PF01535.16|0.079,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|89,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|5.8e+03,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|7.5 S_Transcript_222059:104-1855(+)
MASLIAVRPPSISSLFKVRSLNPSRHFFFLNPNSSKPQSSSFKPLSTSATFPNNYNYSPQSNNPSYHQNPNPNPGHPNTNWYPQNGPQNRNFIPNNYQQQQQPRNPNQMGNQNQAYPLHRNPNQGYPPGQSPNQGYPLQQNPNFIPNNQQQPRTPNQMGNQNQGYPLHRSPNQGYPNGQNPNQGYPLPPPPPPPRNSNNQVQSQQGLVQGQNVDLMGMAMEGKVKDIIELMEKGAKADNGECFFVLFDKCSNPKSLDSAKKVHDFFLRSTFRGDVRLNNKVLEMYAKCGSMVDARRVFDHMPERNIESWHLMIKGYASNSLGDEGLQLFEKMKGLGLRPTSETFVAVLAACSGAEAVEEGFLYLEKMRSEYGIEPQVEHYLGVLEVLGASGHLVEAREYIENLPMGPTVVFWEALRDYARIHGDIDLEDHIDELIVSFDPSRGVTNKIPAPPPKKRMGVNMMEGRNRLPEFKNPTLYKDDEKYKAALKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST