Transcript Information: S_Transcript_222117.p1


Annotated TAIR IDAT1G55170.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344; Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20580578-20581706 | Forward length=283
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0945350273466
Replicate 26.1570575509344
Replicate 31.715603356614
Condition 2: 8 Hour
Replicate 13.9675144776061
Replicate 28.5845465710579
Replicate 36.940043406273
Condition 3: 24 Hour
Replicate 11.5240616388787
Replicate 24.2165230839716
Replicate 34.985752963802


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_222117.p1 GENE.S_Transcript_222117~~S_Transcript_222117.p1 ORF type:5prime_partial len:86 (-),score=26.70 S_Transcript_222117:33-290(-)
GAATATGAGAAGAAAGCAAATGAGGAGCAGGTAATTCGGAAACAAGCAATTGAGAAAAATCTCATTTCAATGACTCACGAGGTGCAGAAGCTTCGTGCAGAACGGCTGAGCATGGATGGAAGGGCACATGGACTTGGTGGCAGCAGCTACGGAATCTACAATGGGAGCTCTGAAATGAGGTACCCAGGTGCAGCTTTTGGTGATGACTATGGTGGAGCTTGGGGCCCTTATGATAGTCGTGGCCCTCCCAGACGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_222117.p1 GENE.S_Transcript_222117~~S_Transcript_222117.p1 ORF type:5prime_partial len:86 (-),score=26.70 S_Transcript_222117:33-290(-)
EYEKKANEEQVIRKQAIEKNLISMTHEVQKLRAERLSMDGRAHGLGGSSYGIYNGSSEMRYPGAAFGDDYGGAWGPYDSRGPPRR*

Click here to download the sequence:
Link to NCBI Protein BLAST