Transcript Information: S_Transcript_2222.p1


Annotated TAIR IDAT1G15740.1
Annotated Gene NameLeucine-rich repeat family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5411509-5414544 | Forward length=585
E-Value1.8E-174
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.060142558071
Replicate 210.351174725376
Replicate 38.6033138835027
Condition 2: 8 Hour
Replicate 127.728724675093
Replicate 228.009794409524
Replicate 327.316287279306
Condition 3: 24 Hour
Replicate 112.240162599287
Replicate 212.638264900483
Replicate 311.089585207611


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2222.p1 GENE.S_Transcript_2222~~S_Transcript_2222.p1 ORF type:3prime_partial len:373 (+),score=54.18,LRR_8|PF13855.2|96,LRR_8|PF13855.2|8.9e-05,LRR_8|PF13855.2|1.4e+03,LRR_8|PF13855.2|3.6e-06,LRR_8|PF13855.2|7.3e-08,LRR_4|PF12799.3|0.61,LRR_4|PF12799.3|0.018,LRR_4|PF12799.3|17,LRR_4|PF12799.3|2.9,LRR_4|PF12799.3|0.017,LRR_4|PF12799.3|9.3,LRR_4|PF12799.3|0.077,LRR_4|PF12799.3|0.00021 S_Transcript_2222:3-1118(+)
ATGGGGGGATCTTGCTCTAGGAAGAGAGATCAGGTTGTTGATGAGAACTGCCTTCACAGGGGCCTCTCTGGTAGATATTGTAAAAGTGGAAGTTCAAAGTGGCTGGGAACTTCATTTGCTCGTAAGCTTGTGGATGTTCAGCAGGGAAGACGAAAATGTCCATCCCTCATGGATCTGTGTATTATTAAAATATGTCAGGACATCGATAAATATCCTACCTTTTCCATGTTACCAAGGGATATTAGTCAGCAAATATTAAATGAATTGGTCTATTCTCATCGTCTAACTGATTCGTGCTTTCAAGAATTTCGAGATTGTGCCCTCCAGGATATATGTTTAGGCGACTACCCTGGAGTTAATGATTACTGGATGAATGTCATCTCATCACAGGGGACATCTCTGCTTTCTATGGATATTTCTGGTTCAGAGGTTACGGATTTTGGGTTGAGTCACCTCAAAGATTGCAGAGACTTGCAGACCTTGAGCTTTAATTTTTGTGATGATATAACAGATTGTGGGCTTAAAACTATCAATGGGCTTACAAATCTGACTAGCTTAAGTTTTAGACGGAATAGTGCAATAACAGCACAGGGGATGAGTTCGTTTGCCAGCTTGGTTAATTTGGTGAAGCTGGACTTAGAGCGATGCCCTGGAATCCATGGTGGGCTTGTTCATCTCAAAGGTTTAACTAAATTGGCATCTCTCAGCATCAAGTGGTGTAACTGCATAATGGATTCAGATATGGAGCTATCTGGGCTTACAAATTTGAAAGCATTACAAATTTCCTGCAGCAGGGTTACAGATGATGGCATTTCATACTTAGAAGGTTTGCGCAAGCTTGTTTTATTGAATCTGGAGGGTTGCCCCATTACTGCTGCAAGCTTGGATACACTTGCAGCACTTGGTGCATTGTTATATTTGAATCTTAGCAGGTGTAACCTGTCTGGTCCTGAATTTGAGAAGTTCTCCGGATTGAGCAACTTACAAATATTAAACTTGGGATACAGCAAAATTACAGATACATCTCTGGAATACCTGAAAGGTCTTTCGAACTTGGAGAGCTTGAACCTTGATTCTTGCAGGATTACAGATGAAGGACTATCCCACCTGTCCGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2222.p1 GENE.S_Transcript_2222~~S_Transcript_2222.p1 ORF type:3prime_partial len:373 (+),score=54.18,LRR_8|PF13855.2|96,LRR_8|PF13855.2|8.9e-05,LRR_8|PF13855.2|1.4e+03,LRR_8|PF13855.2|3.6e-06,LRR_8|PF13855.2|7.3e-08,LRR_4|PF12799.3|0.61,LRR_4|PF12799.3|0.018,LRR_4|PF12799.3|17,LRR_4|PF12799.3|2.9,LRR_4|PF12799.3|0.017,LRR_4|PF12799.3|9.3,LRR_4|PF12799.3|0.077,LRR_4|PF12799.3|0.00021 S_Transcript_2222:3-1118(+)
MGGSCSRKRDQVVDENCLHRGLSGRYCKSGSSKWLGTSFARKLVDVQQGRRKCPSLMDLCIIKICQDIDKYPTFSMLPRDISQQILNELVYSHRLTDSCFQEFRDCALQDICLGDYPGVNDYWMNVISSQGTSLLSMDISGSEVTDFGLSHLKDCRDLQTLSFNFCDDITDCGLKTINGLTNLTSLSFRRNSAITAQGMSSFASLVNLVKLDLERCPGIHGGLVHLKGLTKLASLSIKWCNCIMDSDMELSGLTNLKALQISCSRVTDDGISYLEGLRKLVLLNLEGCPITAASLDTLAALGALLYLNLSRCNLSGPEFEKFSGLSNLQILNLGYSKITDTSLEYLKGLSNLESLNLDSCRITDEGLSHLSG

Click here to download the sequence:
Link to NCBI Protein BLAST