Transcript Information: S_Transcript_22220.p1


Annotated TAIR IDAT3G62980.1
Annotated Gene NameF-box/RNI-like superfamily protein
Annotated Gene Symbol(s)TIR1
Annotation TypeOrtholog
Chromosome Positionchr3:23273479-23276181 | Reverse length=594
E-Value3.2E-301
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4264925285189
Replicate 21.2934633743937
Replicate 30.83409359172063
Condition 2: 8 Hour
Replicate 12.643348213514
Replicate 23.2602191485029
Replicate 32.892099926304
Condition 3: 24 Hour
Replicate 10.76841298710633
Replicate 20.45555400153462
Replicate 31.0984474950302


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22220.p1 GENE.S_Transcript_22220~~S_Transcript_22220.p1 ORF type:complete len:597 (+),score=95.72,LRR_4|PF12799.3|2.1e+03,LRR_4|PF12799.3|0.042,LRR_4|PF12799.3|4.3,LRR_4|PF12799.3|19,LRR_4|PF12799.3|6.5e+03,LRR_4|PF12799.3|1.3e+02,LRR_4|PF12799.3|3.4,F-box-like|PF12937.3|3.6e-07,F-box|PF00646.29|3.1e-06,F-box|PF00646.29|3.5e+03 S_Transcript_22220:148-1938(+)
ATGGAGCCCCAAAACCCAAAACCCAGCCCATCAAAAAAACCCAACAATAACAACAACAGCAACAACTCATTCCCAGAAGAGGTTCTTGAACACGTGCTGTCATTCATAGACTTCCACTCGGACCTCAACTCAGTCTCACTCGTTTGCAAAACCTGGTACGACATCGAACGTTGGTGTCGCCGTAAACTCTTCATAGGAAACTGTTATTCCGTTAGCCCTTCGGTTGTGATTAGAAGGTTTAGAGACCTAAGATCAGTTACTATAAAAGGAAAGCCTCATTTTGCTGATTTTGATTTGGTGCCTGATGGTTGGGGGGCCCATGCTTTGCCTTGGATTTCTGCTTTCTCTCAAGCTTTTCCTGCCCTTCAAGAACTTAGGTTGAAGAGAATGGTTGTCACTGATGAGGGTCTTGAGTTGATTGCTAAAAGGTTTCGGAACTTTAAAGTTTTGGTTCTCGTCTCCTGTGAAGGGTTCTCTACTGATGGCTTGGCCTCTGTTGCTGCTAACTGTGGGAATTTGACGACTCTTGATTTATCCGAGAGTGAAGTTGATGACCTGAGTGGGGATTGGTTAACTCATTTTCCGGAGTCCTATACTTCATTGGAATCTCTTAACGTTGCCTGCCTGACCAATGAGCCGCCCTTCTCTGTTTTGGAATGCTTGGTCAGCAGGTGTCCAAACCTCAAGTCACTTCGGCTTAATCGTGCATTGTCTTTGGAGAAGCTCCTGATTCTCCTGGAGAAGGCACCTCAACTAATCGATATCGGCACAGGCATGTTTTCAACCGATCTCGAAGAAGCATTTTCAAGGCTCACAAAAGCTTTTACAGCATGCAAGGGACTCCGGAGTCTTTGTGGACTGCATGACGCTTCCCCGTCTCTTCTTCCAGCTCTAGATCCTGTGTGTTCAGGACTCACTTATCTGAACCTGAGTTGTGCGGCCACCATCCAATCCCCTGATTTGATCAAACTGCTAAGTCACTGCCACAAGCTTCAGCGCCTTTGGGTTCTTGATTATATTGAAGACAGCGGCCTTGAAAAGCTTGCTGAAAGCTGCAAAGAATTGTGGGAGCTAAGGGTCTTCCCATCTGACCCATTTGCTCTAGAGCCAAATGTTTGCTTGACTGAAGATGGTCTTATTTCTGTCGCGATGGGGTGCCCTAAACTGCAGTCTGTCCTGTACTTCTGTCGTCAGATGTCGAATGAAGCATTGATCACTGTTGCCAAGAATCGGCCAAACTTTACACGATTCCGTTTATGCATCCTCCAGCCTCAGTGCCCTGATTACCTAACTAATCAGCCACTTGATGATGGTTTTGGAGCCATCGTTGAGCACTGCAAGGATCTGAAACGCCTTTCCTTGTCTGGCCTCCTTACTGACCGTGTATTTGAGTACATTGGGAAACATGCCAAGAAGCTCGAGATGCTTTCGTTGGCATTTGCTGGAGATAGTGATTTGGGACTTCATCATCTTCTGTCAGGTTGCACGAATCTTCGTAAGCTCGAGATCAGGGATTGCCCTTTCGATGGGAAGGCACTCGTGGCAAATGCAGCAAAGCTGGAGATGATGCGATCCCTTTGGATGTCTTCCTGCAAAGTGAGCCATCAAGTGTGTAAAGGGCTTGGCAGGAAGATGCCACGATTAAATGTCGAGGTGATGGATGTGGATGGAAATCCTGATTCTAGGGCAGATGATTGTCCGGTTGAGAAGCTTTATGTTTACAGGACAGTTGTGGGACGCAGGTTCGACACCCCGGAATTTGTATTCACGATGAACAAAAATTCACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22220.p1 GENE.S_Transcript_22220~~S_Transcript_22220.p1 ORF type:complete len:597 (+),score=95.72,LRR_4|PF12799.3|2.1e+03,LRR_4|PF12799.3|0.042,LRR_4|PF12799.3|4.3,LRR_4|PF12799.3|19,LRR_4|PF12799.3|6.5e+03,LRR_4|PF12799.3|1.3e+02,LRR_4|PF12799.3|3.4,F-box-like|PF12937.3|3.6e-07,F-box|PF00646.29|3.1e-06,F-box|PF00646.29|3.5e+03 S_Transcript_22220:148-1938(+)
MEPQNPKPSPSKKPNNNNNSNNSFPEEVLEHVLSFIDFHSDLNSVSLVCKTWYDIERWCRRKLFIGNCYSVSPSVVIRRFRDLRSVTIKGKPHFADFDLVPDGWGAHALPWISAFSQAFPALQELRLKRMVVTDEGLELIAKRFRNFKVLVLVSCEGFSTDGLASVAANCGNLTTLDLSESEVDDLSGDWLTHFPESYTSLESLNVACLTNEPPFSVLECLVSRCPNLKSLRLNRALSLEKLLILLEKAPQLIDIGTGMFSTDLEEAFSRLTKAFTACKGLRSLCGLHDASPSLLPALDPVCSGLTYLNLSCAATIQSPDLIKLLSHCHKLQRLWVLDYIEDSGLEKLAESCKELWELRVFPSDPFALEPNVCLTEDGLISVAMGCPKLQSVLYFCRQMSNEALITVAKNRPNFTRFRLCILQPQCPDYLTNQPLDDGFGAIVEHCKDLKRLSLSGLLTDRVFEYIGKHAKKLEMLSLAFAGDSDLGLHHLLSGCTNLRKLEIRDCPFDGKALVANAAKLEMMRSLWMSSCKVSHQVCKGLGRKMPRLNVEVMDVDGNPDSRADDCPVEKLYVYRTVVGRRFDTPEFVFTMNKNSL*

Click here to download the sequence:
Link to NCBI Protein BLAST