Transcript Information: S_Transcript_22221.p1


Annotated TAIR IDAT3G62980.1
Annotated Gene NameF-box/RNI-like superfamily protein
Annotated Gene Symbol(s)TIR1
Annotation TypeOrtholog
Chromosome Positionchr3:23273479-23276181 | Reverse length=594
E-Value5.2e-310
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6866837274323
Replicate 27.908604632007
Replicate 36.9507799310052
Condition 2: 8 Hour
Replicate 17.358509891674
Replicate 27.494756663225
Replicate 36.2483640383111
Condition 3: 24 Hour
Replicate 17.4279922086945
Replicate 26.8333100230193
Replicate 36.6329329507592


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22221.p1 GENE.S_Transcript_22221~~S_Transcript_22221.p1 ORF type:complete len:597 (+),score=111.89,LRR_4|PF12799.3|0.54,LRR_4|PF12799.3|0.16,LRR_4|PF12799.3|70,LRR_4|PF12799.3|6.5e+03,LRR_4|PF12799.3|1.3e+02,LRR_4|PF12799.3|3.4,F-box-like|PF12937.3|3.6e-07,F-box-like|PF12937.3|1.1e+04,F-box|PF00646.29|3.1e-06 S_Transcript_22221:148-1938(+)
ATGGAGCCCCAAAACCCAAAACCCAGCCCATCAAAAAAACCCAACAATAACAACAACAGCAACAACTCATTCCCAGAAGAGGTTCTTGAACACGTGCTGTCATTCATAGACTTCCACTCGGACCTCAACTCAGTCTCACTCGTTTGCAAAACCTGGTACGACATCGAACGTTGGTGTCGCCGTAAACTCTTCATAGGAAACTGTTATTCCGTTAGCCCTTCGGTTGTGATTAGAAGGTTTAGAGACCTAAGATCAGTTACTATAAAAGGAAAGCCTCATTTTGCTGATTTTGATTTGGTGCCTGATGGTTGGGGGGCCCATGCTTTGCCTTGGATTTCTGCTTTCTCTCAAGCTTTTCCTGCCCTTCAAGAACTTAGGTTGAAGAGAATGGTTGTCACTGATGAGGGTCTTGAGTTGATTGCTAAAAAGTTTCGCAATTTTAGGGTTTTGGTTCTTGTCTCTTGTGATGGGTTCTCCACTGATGGGTTGGTCTCCATTGCTGCCAATTGCAGGAATTTGAGAACTCTTGACCTGTGTGAATGTCAAGTTGATGACCTGAGTGGGAATTGGATAAGTCATTTTCCCGATTCTTATACGTCACTCGAATCTCTTAATATTTCTTGCCTCGACAGTGAGCTGAGGTTCTCTGCTTTGGAGCGTTTGGTCAGCAGATGCCCAAACCTCAAGTCACTTCGGCTTAATCGTGCAGTGCCTTTGGAGAAGCTTCCTGTTCTCCTGGAGAAGGCATGTCAATTGGCTGACTTTGGCACAGGCTTGTTTGCTTCAGATCTCAGTGAAACTTACTCAAGGCTCACAAGAGCTTTTGAAGGTTGCAAAGGGATTAGGAGTCTTTCTGGACTCTATGATGCGGTCCCACCTTATCTTCCTCCTCTATATCCTGTGTGCTCGGGGCTCACTCTTTTGAACCTGAGTTATGCCACCACCATTCATTCACCTGATTTGATCAAACTGCTAAGTCACTGCCACAAGCTTCAGCGCCTTTGGGTTCTTGATTATATTGAAGACAGCGGCCTTGAAAAGCTTGCTGAAAGCTGCAAAGAATTGTGGGAGCTAAGGGTCTTCCCATCTGACCCATTTGCTCTAGAGCCAAATGTTTGCTTGACTGAAGATGGTCTTATTTCTGTCGCGATGGGGTGCCCTAAACTGCAGTCTGTCCTGTACTTCTGTCGTCAGATGTCGAATGAAGCATTGATCACTGTTGCCAAGAATCGGCCAAACTTTACACGATTCCGTTTATGCATCCTCCAGCCTCAGTGCCCTGATTACCTAACTAATCAGCCACTTGATGATGGTTTTGGAGCCATCGTTGAGCACTGCAAGGATCTGAAACGCCTTTCCTTGTCTGGCCTCCTTACTGACCGTGTATTTGAGTACATTGGGAAACATGCCAAGAAGCTCGAGATGCTTTCGTTGGCATTTGCTGGAGATAGTGATTTGGGACTTCATCATCTTCTGTCAGGTTGCACGAATCTTCGTAAGCTCGAGATCAGGGATTGCCCTTTCGATGGGAAGGCACTCGTGGCAAATGCAGCAAAGCTGGAGATGATGCGATCCCTTTGGATGTCTTCCTGCAAAGTGAGCCATCAAGTGTGTAAAGGGCTTGGCAGGAAGATGCCACGATTAAATGTCGAGGTGATGGATGTGGATGGAAATCCTGATTCTAGGGCAGATGATTGTCCGGTTGAGAAGCTTTATGTTTACAGGACAGTTGTGGGACGCAGGTTCGACACCCCGGAATTTGTATTCACGATGAACAAAAATTCACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22221.p1 GENE.S_Transcript_22221~~S_Transcript_22221.p1 ORF type:complete len:597 (+),score=111.89,LRR_4|PF12799.3|0.54,LRR_4|PF12799.3|0.16,LRR_4|PF12799.3|70,LRR_4|PF12799.3|6.5e+03,LRR_4|PF12799.3|1.3e+02,LRR_4|PF12799.3|3.4,F-box-like|PF12937.3|3.6e-07,F-box-like|PF12937.3|1.1e+04,F-box|PF00646.29|3.1e-06 S_Transcript_22221:148-1938(+)
MEPQNPKPSPSKKPNNNNNSNNSFPEEVLEHVLSFIDFHSDLNSVSLVCKTWYDIERWCRRKLFIGNCYSVSPSVVIRRFRDLRSVTIKGKPHFADFDLVPDGWGAHALPWISAFSQAFPALQELRLKRMVVTDEGLELIAKKFRNFRVLVLVSCDGFSTDGLVSIAANCRNLRTLDLCECQVDDLSGNWISHFPDSYTSLESLNISCLDSELRFSALERLVSRCPNLKSLRLNRAVPLEKLPVLLEKACQLADFGTGLFASDLSETYSRLTRAFEGCKGIRSLSGLYDAVPPYLPPLYPVCSGLTLLNLSYATTIHSPDLIKLLSHCHKLQRLWVLDYIEDSGLEKLAESCKELWELRVFPSDPFALEPNVCLTEDGLISVAMGCPKLQSVLYFCRQMSNEALITVAKNRPNFTRFRLCILQPQCPDYLTNQPLDDGFGAIVEHCKDLKRLSLSGLLTDRVFEYIGKHAKKLEMLSLAFAGDSDLGLHHLLSGCTNLRKLEIRDCPFDGKALVANAAKLEMMRSLWMSSCKVSHQVCKGLGRKMPRLNVEVMDVDGNPDSRADDCPVEKLYVYRTVVGRRFDTPEFVFTMNKNSL*

Click here to download the sequence:
Link to NCBI Protein BLAST