Transcript Information: S_Transcript_222222.p1


Annotated TAIR IDAT2G36990.1
Annotated Gene NameRNApolymerase sigma-subunit F
Annotated Gene Symbol(s)SIGF, SIG6, ATSIG6, SOLDAT8
Annotation TypeOrtholog
Chromosome Positionchr2:15537502-15540016 | Reverse length=547
E-Value2.6E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.68882836495
Replicate 28.6804417931206
Replicate 37.860838330715
Condition 2: 8 Hour
Replicate 18.0407209392469
Replicate 210.452421085774
Replicate 36.6393623687647
Condition 3: 24 Hour
Replicate 18.4156518365404
Replicate 29.6599852620497
Replicate 38.4762608246702


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_222222.p1 GENE.S_Transcript_222222~~S_Transcript_222222.p1 ORF type:5prime_partial len:122 (-),score=7.08,Sigma70_r4|PF04545.12|3.3e+03,Sigma70_r4|PF04545.12|7e+03,Sigma70_r4|PF04545.12|2.5e-19,Sigma70_r3|PF04539.12|3.4e-05,Sigma70_r3|PF04539.12|84 S_Transcript_222222:88-453(-)
TTGCTATTTTTTATGAGAAATCCTCTTTCTATGCAACAGCCAGTGTGGACAGATCAGGATACCACTTTTCAGGAGGTGACTGCAGACACAAGAATCGAGAGTCCAGGAATAAGCGTGGAAAGGCAACTTATGAGGAAACATGTACATAATCTACTTGGTACTCTCACCCCTAGAGAACGGCAAATAATAAAGCTGAGATATGGGATTGGATCTGGGTCCGGGAATCAAAGTACTTTAACCGAAGTTGGGACCGTCTTTGGGCTGTCGAAGGAGAGGGTCCGGCAGATAGAAAGTCGAGCACTGTACAAGCTTAAGCAATCACTCAACAACCATGGCTTAGAAGCATATACAGATTTACTCGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_222222.p1 GENE.S_Transcript_222222~~S_Transcript_222222.p1 ORF type:5prime_partial len:122 (-),score=7.08,Sigma70_r4|PF04545.12|3.3e+03,Sigma70_r4|PF04545.12|7e+03,Sigma70_r4|PF04545.12|2.5e-19,Sigma70_r3|PF04539.12|3.4e-05,Sigma70_r3|PF04539.12|84 S_Transcript_222222:88-453(-)
LLFFMRNPLSMQQPVWTDQDTTFQEVTADTRIESPGISVERQLMRKHVHNLLGTLTPRERQIIKLRYGIGSGSGNQSTLTEVGTVFGLSKERVRQIESRALYKLKQSLNNHGLEAYTDLLV*

Click here to download the sequence:
Link to NCBI Protein BLAST