Transcript Information: S_Transcript_22223.p1


Annotated TAIR IDAT3G62980.1
Annotated Gene NameF-box/RNI-like superfamily protein
Annotated Gene Symbol(s)TIR1
Annotation TypeOrtholog
Chromosome Positionchr3:23273479-23276181 | Reverse length=594
E-Value1.6E-295
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7565560076097
Replicate 24.5520564145288
Replicate 33.037988140227
Condition 2: 8 Hour
Replicate 18.3030637840418
Replicate 26.700387279785
Replicate 39.8244422405654
Condition 3: 24 Hour
Replicate 12.0354633535329
Replicate 23.4693355491247
Replicate 34.1127460094865


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22223.p1 GENE.S_Transcript_22223~~S_Transcript_22223.p1 ORF type:complete len:601 (+),score=108.29,F-box-like|PF12937.3|7.4e-07,LRR_4|PF12799.3|14,LRR_4|PF12799.3|13,LRR_4|PF12799.3|19,LRR_4|PF12799.3|6.5e+03,LRR_4|PF12799.3|1.3e+02,LRR_4|PF12799.3|3.4 S_Transcript_22223:139-1941(+)
ATGGAGAAACAATCCAGTACTTCACCGCCATCAAAGCTGCCAGTACCCAAAGGCAACCACTCCTCACCATGTTTCTCCTCAATCCCAGAAAAGATCCTCAAACTGGTGCTCTCCTACATTGACTCAACCTCAGACCTCAACTCGGTCTCACTCGTGTGCAAAACATGGTACGAAATAGACCGTTCATGTCGTCGTAAAATCTTCATTGGAAACTGTTATGCTGTTAGCCCTTCAATGGTGATCAAAAGGTTTAAAGACCTCAGATCAGTTACTATAAAAGGAAAGCCTCATTTTGCTGATTTCAACTTGGTCCCAGATGGTTGGGGAGCTTATGCTTTGCCTTGGATTGAAGCTTTTGCTGAAGCTTTTCCTGACATTGAAGAGCTTAGGTTGAAGAGAATGGTTGTTACTGATGAGGGTCTTGAGTTGATTGCTAAAAGGTTTCGGAACTTTAAAGTTTTGGTTCTCGTCTCCTGTGAAGGGTTCTCTACTGATGGCTTGGCCTCTGTTGCTGCTAACTGTGGGAATTTGACGACTCTTGATTTATCCGAGAGTGAAGTTGATGACCTGAGTGGGGATTGGTTAACTCATTTTCCGGAGTCCTATACGCCATTGGAATCTCTTAACGTTGCCTGCCTGACCAATGAGCCGCCCTTCTCTGTTTTGGAATGCTTGGTCAGCAGGTGTCCAAACCTCAAGTCACTTCGGCTTAATCGTGCATTGTCTTTGGAGAAGCTCCTGATTCTCCTGGAGAAGGCACCTCAACTAATCGATATCGGCACAGGCATGTTTTCAACCGATCTCGAAGAAGCATTTTCAAGGCTCACAAAAGCTTTTACAGCATGCAAGGGACTCCGGAGTCTTTGTGGACTGCATGACGCTTCCCCGTCTCTTCTTCCAGCTCTAGATCCTGTGTGTTCAGGACTCACTTATCTGAACCTGAGTTGTGCGGCCACCATCCAATCCCCTGATTTGATCAAACTGCTAAGTCACTGCCACAAGCTTCAGCGCCTTTGGGTTCTTGATTATATTGAAGACAGCGGCCTTGAAAAGCTTGCTGAAAGCTGCAAAGAATTGTGGGAGCTAAGGGTCTTCCCATCTGACCCATTTGCTCTAGAGCCAAATGTTTGCTTGACTGAAGATGGTCTTATTTCTGTCGCGATGGGGTGCCCTAAACTGCAGTCTGTCCTGTACTTCTGTCGTCAGATGTCGAATGAAGCATTGATCACTGTTGCCAAGAATCGGCCAAACTTTACACGATTCCGTTTATGCATCCTCCAGCCTCAGTGCCCTGATTACCTAACTAATCAGCCACTTGATGATGGTTTTGGAGCCATCGTTGAGCACTGCAAGGATCTGAAACGCCTTTCCTTGTCTGGCCTCCTTACTGACCGTGTATTTGAGTACATTGGGAAACATGCCAAGAAGCTCGAGATGCTTTCGTTGGCATTTGCTGGAGATAGTGATTTGGGACTTCATCATCTTCTGTCAGGTTGCACGAATCTTCGTAAGCTCGAGATCAGGGATTGCCCTTTCGATGGGAAGGCACTCGTGGCAAATGCAGCAAAGCTGGAGATGATGCGATCCCTTTGGATGTCTTCCTGCAAAGTGAGCCATCAAGTGTGTAAAGGGCTTGGCAGGAAGATGCCACGATTAAATGTCGAGGTGATGGATGTGGATGGAAATCCTGATTCTAGGGCAGATGATTGTCCGGTTGAGAAGCTTTATGTTTACAGGACAGTTGTGGGACGCAGGTTCGACACCCCGGAATTTGTATTCACGATGAACAAAAATTCACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22223.p1 GENE.S_Transcript_22223~~S_Transcript_22223.p1 ORF type:complete len:601 (+),score=108.29,F-box-like|PF12937.3|7.4e-07,LRR_4|PF12799.3|14,LRR_4|PF12799.3|13,LRR_4|PF12799.3|19,LRR_4|PF12799.3|6.5e+03,LRR_4|PF12799.3|1.3e+02,LRR_4|PF12799.3|3.4 S_Transcript_22223:139-1941(+)
MEKQSSTSPPSKLPVPKGNHSSPCFSSIPEKILKLVLSYIDSTSDLNSVSLVCKTWYEIDRSCRRKIFIGNCYAVSPSMVIKRFKDLRSVTIKGKPHFADFNLVPDGWGAYALPWIEAFAEAFPDIEELRLKRMVVTDEGLELIAKRFRNFKVLVLVSCEGFSTDGLASVAANCGNLTTLDLSESEVDDLSGDWLTHFPESYTPLESLNVACLTNEPPFSVLECLVSRCPNLKSLRLNRALSLEKLLILLEKAPQLIDIGTGMFSTDLEEAFSRLTKAFTACKGLRSLCGLHDASPSLLPALDPVCSGLTYLNLSCAATIQSPDLIKLLSHCHKLQRLWVLDYIEDSGLEKLAESCKELWELRVFPSDPFALEPNVCLTEDGLISVAMGCPKLQSVLYFCRQMSNEALITVAKNRPNFTRFRLCILQPQCPDYLTNQPLDDGFGAIVEHCKDLKRLSLSGLLTDRVFEYIGKHAKKLEMLSLAFAGDSDLGLHHLLSGCTNLRKLEIRDCPFDGKALVANAAKLEMMRSLWMSSCKVSHQVCKGLGRKMPRLNVEVMDVDGNPDSRADDCPVEKLYVYRTVVGRRFDTPEFVFTMNKNSL*

Click here to download the sequence:
Link to NCBI Protein BLAST