Transcript Information: S_Transcript_22227.p1


Annotated TAIR IDAT3G62980.1
Annotated Gene NameF-box/RNI-like superfamily protein
Annotated Gene Symbol(s)TIR1
Annotation TypeOrtholog
Chromosome Positionchr3:23273479-23276181 | Reverse length=594
E-Value3.1E-301
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44281200058537
Replicate 20.51394185325326
Replicate 30.27618074002064
Condition 2: 8 Hour
Replicate 12.022541178164
Replicate 21.3773018297336
Replicate 32.1280380304474
Condition 3: 24 Hour
Replicate 10.10904267965355
Replicate 21.0181745633301
Replicate 30.71343553225786


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22227.p1 GENE.S_Transcript_22227~~S_Transcript_22227.p1 ORF type:complete len:601 (+),score=120.34,LRR_4|PF12799.3|0.17,LRR_4|PF12799.3|0.84,LRR_4|PF12799.3|72,LRR_4|PF12799.3|6.5e+03,LRR_4|PF12799.3|1.3e+02,LRR_4|PF12799.3|3.4,F-box-like|PF12937.3|7.4e-07 S_Transcript_22227:139-1941(+)
ATGGAGAAACAATCCAGTACTTCACCGCCATCAAAGCTGCCAGTACCCAAAGGCAACCACTCCTCACCATGTTTCTCCTCAATCCCAGAAAAGATCCTCAAACTGGTGCTCTCCTACATTGACTCAACCTCAGACCTCAACTCGGTCTCACTCGTGTGCAAAACATGGTACGAAATAGACCGTTCATGTCGTCGTAAAATCTTCATTGGAAACTGTTATGCTGTTAGCCCTTCAATGGTGATCAAAAGGTTTAAAGACCTCAGATCAGTTACTATAAAAGGAAAGCCTCATTTTGCTGATTTCAACTTGGTCCCAGATGGTTGGGGAGCTTATGCTTTGCCTTGGATTGAAGCTTTTGCTGAAGCTTTTCCTGACATTGAAGAGCTTAGGTTGAAGAGAATGGTTGTTACTGATGAGGGTCTTGAGTTGATTGCTAAAAGGTTTCGGAACTTTAAAGTTTTGGTTCTCGTCTCCTGTGAAGGGTTCTCTACTGATGGCTTGGCCTCTGTTGCTACTAACTGTGGGAATTTGACAACTCTTGATTTTTCCGAGAGTGAAGTTGATGACCTGAGTGGGGATTGGTTAAGTCATTTTCCGGAGTCCTACACGTCATTGGAATCTCTTAACGTTGCCTGCCTGACCAATGAGCCGCCCTTCTCTGTTTTGGAATGCTTGGTCAGCAGGTGTCCAAACCTCAAGTCACTTCGGCTTAATCGTGCAGTGCCTTTGGAGAAGCTTCCTGTTCTCCTGGAGAAGGCATGTCAATTGGCTGACTTTGGCACAGGCTTGTTTGCTTCAGATCTCAGTGAAACTTACTCAAGGCTCACAAGAGCTTTTGAAGGTTGCAAAGGGATTAGGAGTCTTTCTGGACTCTATGATGCGGTCCCACCTTATCTTCCTCCTCTATATCCTGTGTGCTCGGGGCTCACTCTTTTGAACCTGAGTTATGCCACCACCATTCATTCACCTGATTTGATCAAACTGCTAAGTCACTGCCACAAGCTTCAGCGCCTTTGGGTTCTTGATTATATTGAAGACAGCGGCCTTGAAAAGCTTGCTGAAAGCTGCAAAGAATTGTGGGAGCTAAGGGTCTTCCCATCTGACCCATTTGCTCTAGAGCCAAATGTTTGCTTGACTGAAGATGGTCTTATTTCTGTCGCGATGGGGTGCCCTAAACTGCAGTCTGTCCTGTACTTCTGTCGTCAGATGTCGAATGAAGCATTGATCACTGTTGCCAAGAATCGGCCAAACTTTACACGATTCCGTTTATGCATCCTCCAGCCTCAGTGCCCTGATTACCTAACTAATCAGCCACTTGATGATGGTTTTGGAGCCATCGTTGAGCACTGCAAGGATCTGAAACGCCTTTCCTTGTCTGGCCTCCTTACTGACCGTGTATTTGAGTACATTGGGAAACATGCCAAGAAGCTCGAGATGCTTTCGTTGGCATTTGCTGGAGATAGTGATTTGGGACTTCATCATCTTCTGTCAGGTTGCACGAATCTTCGTAAGCTCGAGATCAGGGATTGCCCTTTCGATGGGAAGGCACTCGTGGCAAATGCAGCAAAGCTGGAGATGATGCGATCCCTTTGGATGTCTTCCTGCAAAGTGAGCCATCAAGTGTGTAAAGGGCTTGGCAGGAAGATGCCACGATTAAATGTCGAGGTGATGGATGTGGATGGAAATCCTGATTCTAGGGCAGATGATTGTCCGGTTGAGAAGCTTTATGTTTACAGGACAGTTGTGGGACGCAGGTTCGACACCCCGGAATTTGTATTCACGATGAACAAAAATTCACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22227.p1 GENE.S_Transcript_22227~~S_Transcript_22227.p1 ORF type:complete len:601 (+),score=120.34,LRR_4|PF12799.3|0.17,LRR_4|PF12799.3|0.84,LRR_4|PF12799.3|72,LRR_4|PF12799.3|6.5e+03,LRR_4|PF12799.3|1.3e+02,LRR_4|PF12799.3|3.4,F-box-like|PF12937.3|7.4e-07 S_Transcript_22227:139-1941(+)
MEKQSSTSPPSKLPVPKGNHSSPCFSSIPEKILKLVLSYIDSTSDLNSVSLVCKTWYEIDRSCRRKIFIGNCYAVSPSMVIKRFKDLRSVTIKGKPHFADFNLVPDGWGAYALPWIEAFAEAFPDIEELRLKRMVVTDEGLELIAKRFRNFKVLVLVSCEGFSTDGLASVATNCGNLTTLDFSESEVDDLSGDWLSHFPESYTSLESLNVACLTNEPPFSVLECLVSRCPNLKSLRLNRAVPLEKLPVLLEKACQLADFGTGLFASDLSETYSRLTRAFEGCKGIRSLSGLYDAVPPYLPPLYPVCSGLTLLNLSYATTIHSPDLIKLLSHCHKLQRLWVLDYIEDSGLEKLAESCKELWELRVFPSDPFALEPNVCLTEDGLISVAMGCPKLQSVLYFCRQMSNEALITVAKNRPNFTRFRLCILQPQCPDYLTNQPLDDGFGAIVEHCKDLKRLSLSGLLTDRVFEYIGKHAKKLEMLSLAFAGDSDLGLHHLLSGCTNLRKLEIRDCPFDGKALVANAAKLEMMRSLWMSSCKVSHQVCKGLGRKMPRLNVEVMDVDGNPDSRADDCPVEKLYVYRTVVGRRFDTPEFVFTMNKNSL*

Click here to download the sequence:
Link to NCBI Protein BLAST