Transcript Information: S_Transcript_222335.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value6E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36962501715528
Replicate 20.15321381637163
Replicate 30
Condition 2: 8 Hour
Replicate 10.44427896494027
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.35030617229328


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_222335.p1 GENE.S_Transcript_222335~~S_Transcript_222335.p1 ORF type:complete len:144 (-),score=19.37,zf-RVT|PF13966.2|7.1e-06 S_Transcript_222335:472-903(-)
ATGCTGGGACAGCAGGAGAAGGTCCCTTGGTCTACTTTGGTGCGGAACAGATACAACATCCCCAGAAAATATTTCATTGCTTGGATTATCATGCTGGGGAAGGCAAGGACCAGAGATGTTTTGCATCAAATTGGTGTCTGTCCTGAAACTGAATGTCCTCTCTGCGGTGTCCAAGCTGAGTCCTCATCTCACTCTACTTCCAATGTCACTCTTTTTAGTTCATGGTTTCACCAAACAAAGACTACTTGGCACTTAGGAGAGATAAGCAGATGGATTGACAGGAGATTTAGGGGAACTAAACTCTGCAAGAATGTCTTGAGGGCTGGTTTTGTCGGTTTGATAAAAACAGTTTGGTATGCAAGGAACACTGCAGTCTGGGACAAGAAACCCCTACATCCTGAGAGACTGTTTAACACACTCAGCAACTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_222335.p1 GENE.S_Transcript_222335~~S_Transcript_222335.p1 ORF type:complete len:144 (-),score=19.37,zf-RVT|PF13966.2|7.1e-06 S_Transcript_222335:472-903(-)
MLGQQEKVPWSTLVRNRYNIPRKYFIAWIIMLGKARTRDVLHQIGVCPETECPLCGVQAESSSHSTSNVTLFSSWFHQTKTTWHLGEISRWIDRRFRGTKLCKNVLRAGFVGLIKTVWYARNTAVWDKKPLHPERLFNTLSNY*

Click here to download the sequence:
Link to NCBI Protein BLAST