Transcript Information: S_Transcript_222551.p1


Annotated TAIR IDAT2G13600.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5671493-5673586 | Forward length=697
E-Value5E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17577940049657
Replicate 20.26230529196517
Replicate 30.17054049218653
Condition 2: 8 Hour
Replicate 10.92964052901637
Replicate 21.625431539214
Replicate 30.98554117063983
Condition 3: 24 Hour
Replicate 10.3751433096139
Replicate 20.41914578873033
Replicate 30.26654736491536


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_222551.p1 GENE.S_Transcript_222551~~S_Transcript_222551.p1 ORF type:complete len:757 (+),score=111.28,PPR_2|PF13041.2|0.0034,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|0.0044,PPR_2|PF13041.2|4.2e-07,PPR_2|PF13041.2|7.7e+03,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|0.0049,PPR_2|PF13041.2|0.0048,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|6.2e+02,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|0.75,PPR_2|PF13041.2|58,PPR|PF01535.16|0.14,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|5.2e-05,PPR|PF01535.16|0.016,PPR|PF01535.16|81,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.00051,PPR|PF01535.16|7e-06,PPR|PF01535.16|0.0036,PPR|PF01535.16|9.9e-07,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|14,PPR|PF01535.16|6.3e-07,PPR|PF01535.16|0.013,PPR|PF01535.16|15,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|7,PPR_1|PF12854.3|1e+04,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|0.00014,PPR_1|PF12854.3|0.98,PPR_1|PF12854.3|0.00042,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|0.00087,PPR_1|PF12854.3|0.05,PPR_1|PF12854.3|39,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|1,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.049,PPR_3|PF13812.2|21,PPR_3|PF13812.2|0.94,PPR_3|PF13812.2|91,PPR_3|PF13812.2|0.0073,PPR_3|PF13812.2|15,PPR_3|PF13812.2|9.4e+02 S_Transcript_222551:78-2348(+)
ATGAAAGAAAAATCGGAGGGGATTTTCAAGTGGCAAAACCCGGAAAAGGGCTGGTCTTTCCTCAAAACCGCTATTTTTTCAATTTTCAACGCTGGGAAAGACACTGAAAAAGCCGCCAATTTACGAATGTTAACGAGAACTCTCATCCTTGGAAGTTGGAAACACAAACGCTGGAAGAATTCCATAAAAAGTTTCTCAACTCTTTATCAAAACCTATCAGCCCAACTATACGATACATTCGCCATCAATACTGAGATAACTAGGCATGCGAAAGAGGGTCAATTGGAGTTTGCCCGTCAACTGTTCGACGAAATGCCTAAACGAACTGTTGTTACTTGGAACACCATGCTTACAGGGTATTCTAAATGGGGTTCGTACAATGAAGCACTTAGTCTCGTTTATGATATGCATCGTAGCTCCATGAAGCTTAATGAGACCACATTATTGACCACATTAAGTGTGTGTGCTCATTCTCAGTCCTTAAGGGACGGCAAACAGCTGCATTCCCTTGTTTTGAAATCAGGGTTTCAGAGTTTCCATCTTGTAGGGAGTACATTGTTGTATTTTTATGCAAGTTGTTGTCGAATCCAAGAAACGAGGACTGTGTTTGGTGAGTTGTATGAAAGTAATCCTATGGTTTGGAGTTCATTGTTGGTGGGTTATGTGCAGTGTAACATGATGGATGATGCTTTGGAGGTTTTTATGAGAATGCCTTCTAAGGATGTTCGGGCTTGGACTACATTGATTTCAGGGTATTCGAGGCTTGATGGAGGTTTCGAGAAGGCATTGCTGCTGTTTAAAACGATGAGAGAGAATGGTGATGTAATACCTAATGAGTTTACCTTGGATTGTGTTTTAAGGGCATGTGGGAGACTTGGATTTTTGCACGAAGGACAGAGTGTTCATGGAGTTGCTGTCAAATGTGGGTTTGAACATGATCAGTCTATTGGAAGTGCACTAATTGATTTGTATTTTAGTTGTCAAGTTGCTGATGAGGGTAAACGAGTTTATGATGAACTAGGTAGTCCATCTTTAAATGTTTCAAATTCACTTATTGGCGGATACATTTCAAGGGGAAAGATTGACGATGCTGAGCTAGTTTTCAATCAGATGGCGGAGAGAAATCCAGTGTCATATAACCTGATGATCAAAGGGTATGCCATGTGTGGGAGGACTGATGCTTCAAAAGAATTGTTTGAAAAAATGCCTCTAAAAACTATTGTTTCAATCAACACCATGATTTCTGTGTACTCTGAAAATGGTGAAGTTGGCAATGCCTTGAAACTTTTTGAATCAGCTAGAGGCGAGAGGAACACAGTTACATGGAATTCTATGATTTCAGGTCACATACAAAATGGCCAGCATGAAGATGCTATAAAACTGTACGTGGTGATGCACAGATTGTCAATAGAAAGAACAAGGTCTACATTCTCTTCCATATTTCATGCTTGTGCATGCCTTGGATCTCTTCAACAGGGGATATCGGTTCATTCTCATTTGACTAAAACACCTTTCCAGACTAATGTCTATGTCGGGACATCTCTAGTAGATATGTATGCCAAATGTGGGAGCATTTCTGATGCCCAGTCATCATTTGATTGCATCTTTATACCCAATGTTGCTGCGTGGACAGCATTAATTAATGGTTATGCAGACCATGGTCTTGGCCCCAAGGCATTTGCACTCTTTCAGGAGATGTTAAAACAAGGAATACACCCAAATGAAGCTACCTTTGTTGGAATATTGTCTGCCTGTGGACGTGCTGGCTTAGTGGAGGAGGGTTTGCAAATTTTCCACTCAATGAATAGCTGCTATGGTATAACTCCAAATATAGAGCACCATGTTTGTGTTGTGGATCTCCTTGGCCGAGCAGATCATCTGCAAGAAGCTGAACAGTTCATCAGAGACATGCAGATGGAGGTTGATGCTGTTGTTTGGGGAGCTTTACTTAGTGCTTCTTGGTTTTGGATGAATATGGAAATTGCACAGAGGGTTGCTGAGAAATTGATTACATTGGACCCTAATTCAACATACGCACATATCATTTTATCTAACATTTGTGCCAGATTTGGGAAGTGGGGAGATAAAATGAGAATGCGGAAGAATTTGAGAGACTTAGAGGAACAAAAGGATCCTGGCTGTAGTTGGATTGAACTGTACAATAAAATTTATTCATTCTACGTTGAAGATAGATTTCGTCCACATTGTGATTTAATGTGTACAACCTTGGATAGCCTGACAAAAAAATGTGAACCAGTTTGCTGTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_222551.p1 GENE.S_Transcript_222551~~S_Transcript_222551.p1 ORF type:complete len:757 (+),score=111.28,PPR_2|PF13041.2|0.0034,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|0.0044,PPR_2|PF13041.2|4.2e-07,PPR_2|PF13041.2|7.7e+03,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|0.0049,PPR_2|PF13041.2|0.0048,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|6.2e+02,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|0.75,PPR_2|PF13041.2|58,PPR|PF01535.16|0.14,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|5.2e-05,PPR|PF01535.16|0.016,PPR|PF01535.16|81,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.00051,PPR|PF01535.16|7e-06,PPR|PF01535.16|0.0036,PPR|PF01535.16|9.9e-07,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|14,PPR|PF01535.16|6.3e-07,PPR|PF01535.16|0.013,PPR|PF01535.16|15,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|7,PPR_1|PF12854.3|1e+04,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|0.00014,PPR_1|PF12854.3|0.98,PPR_1|PF12854.3|0.00042,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|0.00087,PPR_1|PF12854.3|0.05,PPR_1|PF12854.3|39,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|1,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.049,PPR_3|PF13812.2|21,PPR_3|PF13812.2|0.94,PPR_3|PF13812.2|91,PPR_3|PF13812.2|0.0073,PPR_3|PF13812.2|15,PPR_3|PF13812.2|9.4e+02 S_Transcript_222551:78-2348(+)
MKEKSEGIFKWQNPEKGWSFLKTAIFSIFNAGKDTEKAANLRMLTRTLILGSWKHKRWKNSIKSFSTLYQNLSAQLYDTFAINTEITRHAKEGQLEFARQLFDEMPKRTVVTWNTMLTGYSKWGSYNEALSLVYDMHRSSMKLNETTLLTTLSVCAHSQSLRDGKQLHSLVLKSGFQSFHLVGSTLLYFYASCCRIQETRTVFGELYESNPMVWSSLLVGYVQCNMMDDALEVFMRMPSKDVRAWTTLISGYSRLDGGFEKALLLFKTMRENGDVIPNEFTLDCVLRACGRLGFLHEGQSVHGVAVKCGFEHDQSIGSALIDLYFSCQVADEGKRVYDELGSPSLNVSNSLIGGYISRGKIDDAELVFNQMAERNPVSYNLMIKGYAMCGRTDASKELFEKMPLKTIVSINTMISVYSENGEVGNALKLFESARGERNTVTWNSMISGHIQNGQHEDAIKLYVVMHRLSIERTRSTFSSIFHACACLGSLQQGISVHSHLTKTPFQTNVYVGTSLVDMYAKCGSISDAQSSFDCIFIPNVAAWTALINGYADHGLGPKAFALFQEMLKQGIHPNEATFVGILSACGRAGLVEEGLQIFHSMNSCYGITPNIEHHVCVVDLLGRADHLQEAEQFIRDMQMEVDAVVWGALLSASWFWMNMEIAQRVAEKLITLDPNSTYAHIILSNICARFGKWGDKMRMRKNLRDLEEQKDPGCSWIELYNKIYSFYVEDRFRPHCDLMCTTLDSLTKKCEPVCCT*

Click here to download the sequence:
Link to NCBI Protein BLAST