Transcript Information: S_Transcript_222686.p1


Annotated TAIR IDAT5G67550.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits to 154 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26946908-26949112 | Reverse length=509
E-Value9E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28616130360409
Replicate 20
Replicate 30.23797078817549
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.82512958470896
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.43392764567942


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_222686.p1 GENE.S_Transcript_222686~~S_Transcript_222686.p1 ORF type:complete len:465 (+),score=43.29 S_Transcript_222686:183-1577(+)
ATGTCCAAGCCCAGAAAATACTACTATGGTTACAGACATCTTACCCTTATCATCCTCTTCTTAATTTCTTCCTCTCTTCTATCTCCTCGTATGCCTGTTGCTTCTGCTGCCTCTTGTTCGTCGTCTTTGCACAGGCGTGATCCTTTGCGTCACTTTAAGTATTACGATGGCAGCTACGATCTTCGAAACAAGCATTACTGGACTTCGGCTGTCTTTACGGGGGTTCATGGCTTCGCAATGGCGGGAGCGTGGCTGCTGTGTGGATTGGGATTCGGGGTTTTCTTAATTGTGAGGAGTTTTTACAGCAGCAGTAATAGCAGTGACTCTACAGCTTCACCAAATCATTCGGATTTCTCCTATTATTTGTTGTTTTTGCTGCTGCTTCTCTTCTTGCTTCTTGCCATGATTGCCACAGGTTTTGTGATTGCAGAAAACCAACAAACTCTGCAAAGAACAAAGAAGCTAAAAGAAACGGTATTTGGAGCAGGGAATCAAGCTCGAAGAACAATTCACAGAGTAAACAAAGCAATGAACCATATTCAAACCCTTCTTTGTCCTTATGATCAAACCACTTGCTCTTTATTGAACGCCACCAGCAACCAGCTTGGAAGAGAGTCTCTTACTATCAAACAATTCATTAATAACAATGGAGGTTCAATCGATCAAGCAATTTGGTCTTCTTCTAATCTTGCTGCACTGGCACCCAGGATTCATCTTGACACATGTACAGCGCTTCAAGATTTTAACGACAACCCTCAAAATAGCAGTCTTAGTTCTTTACTACCATGCGCTGAGGCACTAAAATCCCAAAGTGTCATGGTGAAAATTGGTGAAACGATTCATGATTTTATCACAGAGTTGAATTTGAATATAAATATCATGCCAAAAGAGCTTGGGCTAGATGAAGCAAGTTATGACGATATTCTTCAAGATCGAAAGATTTGTGACCCTTTTTCTGGTCCACCAGACTATAGCTATCTTCAGGGCAAGTGCCCCGAGAAGTCTATTCCAATTCGCGACTTACCAGATATTCTTGCAAGATTTATTTGTAACAACCAGACATCCTTAGAATCATGCAAAGGCGAGGGGAAGTTTCTTCCGGAACCAACTTACTTGATGGCAGACGCCTACATTCAATCAATTCAGAACTTGATTAAAATTTATCCCGATATGGAAAACCTAATTCATTGTACATTCATCAAGGATCGAGTATCTAATGTAGTTATGCATCAATGTAAGCCATTTAAGGCGGCTACACACCTTCTATGGGTGTCCATACTTTGTCTTTCTATCAGTATGGTGGTGTTGATGTTAACTTGTGTGGCCAAAGCTTATCAAGATCAGGGAAGATGCTTCTCCAAGTGTTCCATCATACCAAGACATGAGCAACCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_222686.p1 GENE.S_Transcript_222686~~S_Transcript_222686.p1 ORF type:complete len:465 (+),score=43.29 S_Transcript_222686:183-1577(+)
MSKPRKYYYGYRHLTLIILFLISSSLLSPRMPVASAASCSSSLHRRDPLRHFKYYDGSYDLRNKHYWTSAVFTGVHGFAMAGAWLLCGLGFGVFLIVRSFYSSSNSSDSTASPNHSDFSYYLLFLLLLLFLLLAMIATGFVIAENQQTLQRTKKLKETVFGAGNQARRTIHRVNKAMNHIQTLLCPYDQTTCSLLNATSNQLGRESLTIKQFINNNGGSIDQAIWSSSNLAALAPRIHLDTCTALQDFNDNPQNSSLSSLLPCAEALKSQSVMVKIGETIHDFITELNLNINIMPKELGLDEASYDDILQDRKICDPFSGPPDYSYLQGKCPEKSIPIRDLPDILARFICNNQTSLESCKGEGKFLPEPTYLMADAYIQSIQNLIKIYPDMENLIHCTFIKDRVSNVVMHQCKPFKAATHLLWVSILCLSISMVVLMLTCVAKAYQDQGRCFSKCSIIPRHEQP*

Click here to download the sequence:
Link to NCBI Protein BLAST