Transcript Information: S_Transcript_222809.p1


Annotated TAIR IDAT4G13710.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7962550-7966012 | Forward length=470
E-Value1.6E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97026567003262
Replicate 20.57455181139361
Replicate 30.19211183420417
Condition 2: 8 Hour
Replicate 10.55534870617534
Replicate 21.6312806299801
Replicate 31.2212204357021
Condition 3: 24 Hour
Replicate 10.22755086969369
Replicate 20.35412205588043
Replicate 30.39409444382994


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_222809.p1 GENE.S_Transcript_222809~~S_Transcript_222809.p1 ORF type:internal len:192 (-),score=26.82,Pec_lyase_C|PF00544.15|4e-17 S_Transcript_222809:1-573(-)
GATGGTGATGGGATTTCCATCTTTGGTGCAAGCCACATTTGGATTGACCACAATTCTCTCGCTAATTGTGCCGATGGGCTCATTGATGCTATCATGGCCTCCACAGCCATTACCATTTCTAACAACTACTTCACTCACCATAATGAGGTGATGTTGCTCGGTCACAGCGACTCATACACAAAGGATAAGATAATGCAAGTAACCATTGCCTACAACCACTTTGGAGAGGGTCTGATTCAGAGGATGCCCAGGTGTAGGCATGGGTACTTCCATGTTGTGAACAATGACTACACCCACTGGGAAATGTATGCTATTGGAGGCAGTGCAGAGCCCACCATTAACAGCCAGGGGAATAGATATCTCGCCCCTGTTGATCGTTTTGCCAAAGAGGTGACTAAGAGGGTGGACACAGATGAGGGTCAGTGGAAGCACTGGAACTGGAGATCAGAAGGTGACCTGCTACTAAACGGGGCCTTCTTTACCACATCAGGAGCTGGATCCAGTTCTAGCTACGCCAGAGCCTCCAGCTTGGCGGCCAAGCCATCCAACCTGGTCGGGACCTTGACTTCTGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_222809.p1 GENE.S_Transcript_222809~~S_Transcript_222809.p1 ORF type:internal len:192 (-),score=26.82,Pec_lyase_C|PF00544.15|4e-17 S_Transcript_222809:1-573(-)
DGDGISIFGASHIWIDHNSLANCADGLIDAIMASTAITISNNYFTHHNEVMLLGHSDSYTKDKIMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPVDRFAKEVTKRVDTDEGQWKHWNWRSEGDLLLNGAFFTTSGAGSSSSYARASSLAAKPSNLVGTLTSD

Click here to download the sequence:
Link to NCBI Protein BLAST