Transcript Information: S_Transcript_222829.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value9E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.21705010739
Replicate 28.7521809814935
Replicate 311.736286598655
Condition 2: 8 Hour
Replicate 12.6436434277438
Replicate 22.4035870439376
Replicate 32.8186244766917
Condition 3: 24 Hour
Replicate 110.290564950115
Replicate 210.489036762607
Replicate 313.340585470475


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_222829.p1 GENE.S_Transcript_222829~~S_Transcript_222829.p1 ORF type:complete len:121 (+),score=9.41,zf-RVT|PF13966.2|1.7e-10,zf-RVT|PF13966.2|1.3e+02 S_Transcript_222829:174-536(+)
ATGCCCAAGTACTCTTTTATAGCTTGGCTTATAATGTTGGGGAAAATCAAAACCAGGGATAAACTGCAGAAATTAGGCATCTGTAATAAAGCTGAATGCCCCATGTGTGCTCACCCATTGGAGACACCCACAAATCTTTTCTTCACATGCCCATTCAGTGCTATCCTGATGAAATTGTTTTGTAAATGGTTTGTACTAACACAATATCACTGGTCTTTCCTAGCATTTCAGAGGGAAATACAAAGGAAGATCCAAGCTTCTAAGTACTGTAAACATGTTATGTATGCTGGATTTGTGGGGCTGCTGTACATAGTCTGGAGGGCACAGAATCTGGCGGTATGGGAGGAAGATCCAAGCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_222829.p1 GENE.S_Transcript_222829~~S_Transcript_222829.p1 ORF type:complete len:121 (+),score=9.41,zf-RVT|PF13966.2|1.7e-10,zf-RVT|PF13966.2|1.3e+02 S_Transcript_222829:174-536(+)
MPKYSFIAWLIMLGKIKTRDKLQKLGICNKAECPMCAHPLETPTNLFFTCPFSAILMKLFCKWFVLTQYHWSFLAFQREIQRKIQASKYCKHVMYAGFVGLLYIVWRAQNLAVWEEDPSF*

Click here to download the sequence:
Link to NCBI Protein BLAST