Transcript Information: S_Transcript_222967.p1


Annotated TAIR IDAT1G07740.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2399117-2400496 | Reverse length=459
E-Value5.4E-186
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8224768593654
Replicate 21.0227783238583
Replicate 30.65139906697044
Condition 2: 8 Hour
Replicate 12.400871757558
Replicate 22.1729830908344
Replicate 31.5528100904291
Condition 3: 24 Hour
Replicate 10.72334051293358
Replicate 20.80048782609615
Replicate 30.77948923106319


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_222967.p1 GENE.S_Transcript_222967~~S_Transcript_222967.p1 ORF type:complete len:453 (+),score=77.63,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|5.7e-10,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|5e-16,PPR_2|PF13041.2|8.8e-09,PPR_2|PF13041.2|5.6e-07,PPR_2|PF13041.2|1.6e-19,PPR_2|PF13041.2|0.055,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.49,PPR_1|PF12854.3|3.5e-06,PPR_1|PF12854.3|8.5e-11,PPR_1|PF12854.3|6.8e-05,PPR_1|PF12854.3|0.62,PPR_1|PF12854.3|4.2e-13,PPR_1|PF12854.3|5.8e-08,PPR_1|PF12854.3|0.01,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|0.16,PPR|PF01535.16|0.00043,PPR|PF01535.16|7e-05,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|0.00042,PPR|PF01535.16|0.028,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.00058,PPR_3|PF13812.2|6.8e+02,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|8.6,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|8.6e-06,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.08,TPR_12|PF13424.2|0.51,TPR_12|PF13424.2|4.5,TPR_12|PF13424.2|0.95,TPR_12|PF13424.2|4.2e+02,TPR_12|PF13424.2|2.1e+03,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|1.1e+04,TPR_14|PF13428.2|3e+02,TPR_14|PF13428.2|2.4e+02,TPR_14|PF13428.2|1.1,TPR_14|PF13428.2|3e+03,TPR_14|PF13428.2|3.1e+03,TPR_14|PF13428.2|1.6e+03,TPR_19|PF14559.2|6.4e+02,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|2.5,TPR_19|PF14559.2|0.097,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|8.1e+02 S_Transcript_222967:210-1568(+)
ATGTTGAAGTTAGGAAAACTAAAGCCAGCTCAATTGATCATCCAACAATCACGACATCAATCTACTCGAACATCAACCTCCAAAACCCGAACCAAAAAACCACGTTCAAATCCCAGAAAACCCATCCCATTTCTCGCTGATCTAAAACAACTCCATGACCCTGACGAAGCTCTTTCTCTTTTCAATCACTACGCCCAAATGGGCTTCAAACACCATTACCCTTCTTTCTCTTCTCTCCTTTACAAGCTTGCTCGTTCAAAATCCTTTCACCACATTGACCCACTTCTTATTTTCATCAAAGATCGCAACTTTCGATGCCGAGAATCACTTTTCATAGCCTTAATGAACCATTATGGGAAATCCCATTTGGTTGATAAAGCCATTGATTTGTTCCATCAAATACCAACCTTCAATTGTGAACGTACATTGCAGTCTTTTAATACCCTTCTCAATGTGCTGGTTTCTAATGGGCAGTTTAATGATGCCAAAGATCTCTTCTTGAGGTGCAAAGAACTGGGTTTTCGACCGAATTCGGTTTCTTTCAATATAATGATGAAGGGTTGGTTGGAAAGGGGTGAGTTGGAGAATGCCTGCCAAGTGTTTGATGAAATGCTTGAGAGAGAGATTCAGCCTAGTGTTGTTAGTTATAATAGTTTGATTGGGTTTTTGTGTAAGAGGGGTGACGTGGACAAGGCTATGAGGTTGCTTGATGATGTAATTAAGAAAGGGAACCGTCCTAATGCTGTTACTTATGCATTGTTGATGGAAGGGTTATGTTCTTTGGGGAAGTATACTGAAGCCAAGAAGATGATGTTCGATATGGAATACCGAGGGTGTAAACCAAGGGTTGTGAACTTTGGGGTTTTAATGACTGATCTTACAAAAAGAGGGAAGCTTGAGGGAGCAAAATCATTACTCCTTGAGATGAAGAAGAAAAAGTTAAAGCCAGATGTTGTCATATACAACATATTAGTGAACTTTTTGTGTAAAGAAGGAAGAGTAGAGGAGGCTTATAAGGTGCTTGTTGATATGAAAGTGAAAGGATGTGAGCCTAATGCAGCCACTTATAGGACGCTGGTTGATGGGTTTTGTCAAGTTGGTGAATATGAAAGGGGTTTGAGTATTCTCAATGCAATGCTCATGAGCAGGCATTGCCCTCGCTCGGAAAGCTTCTCTTGTTTGGTTATGGGATTGATCAAGTGTGGAAAAATGGATGATGCTTGCTTCGTTTTGGAAGAGATGGAAAAGAGGAGTATGAGATTCCAACTTGTGTTGTGGGAATCTCTGGTAAGGGATGCTTGTAGTGTTAGTAATTCAGTTGATAAACTTGTATGTGAACTTATCTCTGCCCATCCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_222967.p1 GENE.S_Transcript_222967~~S_Transcript_222967.p1 ORF type:complete len:453 (+),score=77.63,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|5.7e-10,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|5e-16,PPR_2|PF13041.2|8.8e-09,PPR_2|PF13041.2|5.6e-07,PPR_2|PF13041.2|1.6e-19,PPR_2|PF13041.2|0.055,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.49,PPR_1|PF12854.3|3.5e-06,PPR_1|PF12854.3|8.5e-11,PPR_1|PF12854.3|6.8e-05,PPR_1|PF12854.3|0.62,PPR_1|PF12854.3|4.2e-13,PPR_1|PF12854.3|5.8e-08,PPR_1|PF12854.3|0.01,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|0.16,PPR|PF01535.16|0.00043,PPR|PF01535.16|7e-05,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|0.00042,PPR|PF01535.16|0.028,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.00058,PPR_3|PF13812.2|6.8e+02,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|8.6,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|8.6e-06,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.08,TPR_12|PF13424.2|0.51,TPR_12|PF13424.2|4.5,TPR_12|PF13424.2|0.95,TPR_12|PF13424.2|4.2e+02,TPR_12|PF13424.2|2.1e+03,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|1.1e+04,TPR_14|PF13428.2|3e+02,TPR_14|PF13428.2|2.4e+02,TPR_14|PF13428.2|1.1,TPR_14|PF13428.2|3e+03,TPR_14|PF13428.2|3.1e+03,TPR_14|PF13428.2|1.6e+03,TPR_19|PF14559.2|6.4e+02,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|2.5,TPR_19|PF14559.2|0.097,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|8.1e+02 S_Transcript_222967:210-1568(+)
MLKLGKLKPAQLIIQQSRHQSTRTSTSKTRTKKPRSNPRKPIPFLADLKQLHDPDEALSLFNHYAQMGFKHHYPSFSSLLYKLARSKSFHHIDPLLIFIKDRNFRCRESLFIALMNHYGKSHLVDKAIDLFHQIPTFNCERTLQSFNTLLNVLVSNGQFNDAKDLFLRCKELGFRPNSVSFNIMMKGWLERGELENACQVFDEMLEREIQPSVVSYNSLIGFLCKRGDVDKAMRLLDDVIKKGNRPNAVTYALLMEGLCSLGKYTEAKKMMFDMEYRGCKPRVVNFGVLMTDLTKRGKLEGAKSLLLEMKKKKLKPDVVIYNILVNFLCKEGRVEEAYKVLVDMKVKGCEPNAATYRTLVDGFCQVGEYERGLSILNAMLMSRHCPRSESFSCLVMGLIKCGKMDDACFVLEEMEKRSMRFQLVLWESLVRDACSVSNSVDKLVCELISAHP*

Click here to download the sequence:
Link to NCBI Protein BLAST