Transcript Information: S_Transcript_223292.p1


Annotated TAIR IDAT3G08670.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51540.1); Has 48380 Blast hits to 29827 proteins in 1356 species: Archae - 46; Bacteria - 5589; Metazoa - 17361; Fungi - 13192; Plants - 2237; Viruses - 905; Other Eukaryotes - 9050 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2633946-2636536 | Forward length=567
E-Value1E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9042461616796
Replicate 22.579767714404
Replicate 31.8346177255938
Condition 2: 8 Hour
Replicate 12.4563276805075
Replicate 21.7959948297163
Replicate 32.1948254951028
Condition 3: 24 Hour
Replicate 13.6217520621404
Replicate 23.0851261831677
Replicate 32.6850692996721


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_223292.p1 GENE.S_Transcript_223292~~S_Transcript_223292.p1 ORF type:5prime_partial len:573 (-),score=81.26 S_Transcript_223292:79-1797(-)
CAGTATCCTCAGATCCACCCTCTCTCTCTCTCATCATACAACTATGACGTAAAGTATCAAAAAGTCCGCCCTTCTCTCTCCTCTTCCTTCCAATTCCATTCCCCAGATCTCTCATTCTCACTTTCTCTCTCCTGCCTCTGTGACTGTGCTTGTTTGTTCAAGCAAACCCCCTCTTATCCATTCCCAAAATGCTTCCTCTTCCTTCTTCTTCAATCTAGCCCCCCTTTCTTCCAAGTTCCCACGCCAAACACCATGAATCGGAGCTTCAGAGACTACAGCTCCAACGGTATGAGGAACTATCCAGTTGTGCCATCTCAGCACCGGAGAGGAAACAGCCTCAACGGCGGCGGAACTTTCTCCAACGACACTTCCGACGAAAATCTCGATCTCTTCTCCCGTACTCGCCGTACTCACTCTGTCTCCCTTTCTCCTTCCGATGATTCCCAAGTGGCACTGAAATTGGGGAAGATATCAGTTGGATCTGGGAGATTAGCTGCAGCTACTCGGAATGGATTGGATGATCTTTTGACTTCCACTGATGGTGGCAAACATGATTATGATTGGCTATTGACACCGCCAGAAACTCCACTATGTGCTTCTTCTGAGAGGAGCGAGTTTCAATCAAACTTGGCGGCTCCAAGAAACTCTTCTGTTTCTAGATCAGGCTCCACCACCAAGCCTTCCAGGCTGTCAAGTATGCATGTCGATTGCAGTCACTCCTCGAGACCTGCAAGAAGCAGTTCAGTGACGCGCTCATCTATATCTTCTTCGCTCAGCAGCAATTATTCTTCCAATAGATCCTCATCAATTCTCAACACAAGTTCAGCCTCAGTGTCCTCGTACATACAACCATCCTCTCCCAGTACCCGTTCATCATCTACTTCAAGACCTTCAACCCCTTCTACTCGATCCACTCCCTCACGGTCCTCTACCCCTTCTAAAGCACGTTCAGTTTCGGCCATCTCTTCCAGTGACAAAACCAGACCTTCACAAAGCTCTAGACCCTCCACCCCTAGTTCTAGGCCGCAGATCCCAGCTAATTTAAGTTTCCCAACAACTCGATCAAATTCTCGTCCATCAACCCCAACTCGCCGAAATCCAGTATCTGCCTCACCAGCACCCATCTTGTCTGTCTCAACAGGACGTGTTTCATCAAATGGACGCAGCCAAACATCTACATCTCGTCCTAGCTCCCCCAGTCCTAGGATTCGGCCACAGCAACCTGTTATCCCCCCTGATTTTCCTCTCGATACACCACCTAACCTAAGGACAACATTACCAGACAGACCTATATCTGCCGGGAGGTCCAGACCAAGTTCTGCATCAAAGGTGAACATAGAGAGCCCAAGCTCTGTCAGTTTGTCGAGAAGACCATCTTCCCCTGTTGTGACCAGAGGTAGGTCTGCAGAACCACATGGAAGAGGCCACCTGCATTCCAATGGCTATAATGCTGATATGTCTGAAGCCCGTAAATCAGCTTATATCCCTGAATCTGGGAGGAAACCTGTTAAGGCATCCACAGCCACAGAGACCGGTGGTTTTGGGAGGAGCATCTCAAAGAAGTCAATTGACATGGCTATCAGACATATGGTATGTATAATATTTACTTTCTTTGTGCTTGGCTTACAAACTTTTATGCTTGTTCGTCTGGTTCCCCTTGTGAAGTTTCTAGTTCTGTTCCTTGTTGCTCCTCCAATTTCGAAGAGGCATTTAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_223292.p1 GENE.S_Transcript_223292~~S_Transcript_223292.p1 ORF type:5prime_partial len:573 (-),score=81.26 S_Transcript_223292:79-1797(-)
QYPQIHPLSLSSYNYDVKYQKVRPSLSSSFQFHSPDLSFSLSLSCLCDCACLFKQTPSYPFPKCFLFLLLQSSPPFFQVPTPNTMNRSFRDYSSNGMRNYPVVPSQHRRGNSLNGGGTFSNDTSDENLDLFSRTRRTHSVSLSPSDDSQVALKLGKISVGSGRLAAATRNGLDDLLTSTDGGKHDYDWLLTPPETPLCASSERSEFQSNLAAPRNSSVSRSGSTTKPSRLSSMHVDCSHSSRPARSSSVTRSSISSSLSSNYSSNRSSSILNTSSASVSSYIQPSSPSTRSSSTSRPSTPSTRSTPSRSSTPSKARSVSAISSSDKTRPSQSSRPSTPSSRPQIPANLSFPTTRSNSRPSTPTRRNPVSASPAPILSVSTGRVSSNGRSQTSTSRPSSPSPRIRPQQPVIPPDFPLDTPPNLRTTLPDRPISAGRSRPSSASKVNIESPSSVSLSRRPSSPVVTRGRSAEPHGRGHLHSNGYNADMSEARKSAYIPESGRKPVKASTATETGGFGRSISKKSIDMAIRHMVCIIFTFFVLGLQTFMLVRLVPLVKFLVLFLVAPPISKRHLT*

Click here to download the sequence:
Link to NCBI Protein BLAST