Transcript Information: S_Transcript_223348.p1


Annotated TAIR IDAT5G58090.1
Annotated Gene NameO-Glycosyl hydrolases family 17 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23505556-23507193 | Reverse length=477
E-Value1.7E-229
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8671227669818
Replicate 25.0953324613198
Replicate 35.1111508776722
Condition 2: 8 Hour
Replicate 13.9892762487015
Replicate 23.8750315195831
Replicate 34.8243719752614
Condition 3: 24 Hour
Replicate 12.7747542540016
Replicate 23.6638956358991
Replicate 33.4949715111015


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_223348.p1 GENE.S_Transcript_223348~~S_Transcript_223348.p1 ORF type:5prime_partial len:433 (+),score=60.34,Glyco_hydro_17|PF00332.14|2e-68,X8|PF07983.9|1e-18 S_Transcript_223348:3-1301(+)
CAAAAAGTGAAGCTTTTTGATGCAGATTATGATACATTGAAGGCTCTTGGCAAAACTGGGATTGAGGTTATGGTTGGTATTCCTAATGACATGCTTTATACTCTTGCTACCAGTAGGAAGGCTGCTGAAAAATGGGTGTCAGAGAATGTTACTGAGCATCTCTCTTCCAATAATGTGAACATCAGGTATGTTGCAGTTGGTAATGAGCCTTTCTTGGAAACATATAATGGAACTTTCCTGAAAACGACCTTTCCTGCCATGCAAAACATTCAGGCTGCTCTAGCAAAGGCAGGCCATAGCAACCAAGTGAAGATTACGTGTCCTCTCAATGCTGATGTTTATTCAAGCTCTACCAGCGTGCCTTCTGGTGGTGATTTTCGAGCTGAGATACATGGTTATATGATGCAGATTGTGAAGTTCTTAAGCGACAATGGTGCTCCCTTCACTGTAAATATTTACCCTTTCATAAGTCTCTATATTGACCCGAACTTCCCTGTAGATTATGCCTTCTTTGATGGCAATGGACAAGCGATTAACGATGGTGGCACAAACTATTACAATATGTTTGATGCAAACTACGACACCCTTGTCTGGGCTTTGCAGAAGAATGGGTTCACAAATATGCCCATTATAGTTGGGGAAATAGGTTGGCCGACTGACGGGGACCTGCATGCCACCCCCGCTGCTGCCCAGAAATTCATCCAAGGCTTCATTTCACACATTGCAAACGGGAAAGGTACACCTATGAGACCAGGGCCCATTGATGCTTATCTATTCAGTTTGATAGACGAGGATGAGAAGAGCATTCAACCGGGAAACTTTGAACGCCATTGGGGTATATTCACCTTTGATGGGTTACCCAAGTTCCAACTCAGTCTGGGTACCACAAACGCCGGAAATTTGGTTCCAGCAAAGGGGGTGACTTATGAGCAGCGGCAATGGTGTGTGCTAAAACCTTCAGTGAAGTCTGATGACTCACGAATTGCAGATAGTGTGAGTTATGCTTGTGGACTTGGCGACTGCACCAGTCTCGGATATGGAACCTCTTGTGGGGACTTGGATGCCCGAAGTAACATATCCTATGCATTCAACAGTTACTACCAGAAATTCGATCAAGATGATGATGCTTGTGATTTCAAAGGCCTTGGAGCGATCACTAAATCCAATCCATCAAAAGGAACTTGCAAATATATCATCATGATAGAACCCACATTATCCGGTTCAGAGCTGCTACTTCGAGTCCCAGGAATGCTATCGTGTCTACTCAGCACCATAATCCTCTTCTTAACTCTGCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_223348.p1 GENE.S_Transcript_223348~~S_Transcript_223348.p1 ORF type:5prime_partial len:433 (+),score=60.34,Glyco_hydro_17|PF00332.14|2e-68,X8|PF07983.9|1e-18 S_Transcript_223348:3-1301(+)
QKVKLFDADYDTLKALGKTGIEVMVGIPNDMLYTLATSRKAAEKWVSENVTEHLSSNNVNIRYVAVGNEPFLETYNGTFLKTTFPAMQNIQAALAKAGHSNQVKITCPLNADVYSSSTSVPSGGDFRAEIHGYMMQIVKFLSDNGAPFTVNIYPFISLYIDPNFPVDYAFFDGNGQAINDGGTNYYNMFDANYDTLVWALQKNGFTNMPIIVGEIGWPTDGDLHATPAAAQKFIQGFISHIANGKGTPMRPGPIDAYLFSLIDEDEKSIQPGNFERHWGIFTFDGLPKFQLSLGTTNAGNLVPAKGVTYEQRQWCVLKPSVKSDDSRIADSVSYACGLGDCTSLGYGTSCGDLDARSNISYAFNSYYQKFDQDDDACDFKGLGAITKSNPSKGTCKYIIMIEPTLSGSELLLRVPGMLSCLLSTIILFLTLL*

Click here to download the sequence:
Link to NCBI Protein BLAST