Transcript Information: S_Transcript_223400.p1


Annotated TAIR IDAT5G24270.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)SOS3, CBL4, ATSOS3
Annotation TypeHomolog
Chromosome Positionchr5:8238781-8240179 | Reverse length=222
E-Value9E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70833083135461
Replicate 21.8455565409328
Replicate 30.77136918980839
Condition 2: 8 Hour
Replicate 15.1894485942833
Replicate 23.0623062776812
Replicate 35.6734195146338
Condition 3: 24 Hour
Replicate 11.9103890505082
Replicate 21.6373095815612
Replicate 30.86311178572641


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_223400.p1 GENE.S_Transcript_223400~~S_Transcript_223400.p1 ORF type:complete len:263 (+),score=59.97,EF-hand_1|PF00036.28|5.6,EF-hand_1|PF00036.28|7.2e-05,EF-hand_1|PF00036.28|0.0021,EF-hand_1|PF00036.28|0.011,EF-hand_7|PF13499.2|1.5e+02,EF-hand_7|PF13499.2|0.0093,EF-hand_7|PF13499.2|1.8e-06,EF-hand_7|PF13499.2|4.9e-06,EF-hand_6|PF13405.2|3.7,EF-hand_6|PF13405.2|0.0043,EF-hand_6|PF13405.2|0.014,EF-hand_6|PF13405.2|6.7,EF-hand_8|PF13833.2|0.00026,EF-hand_8|PF13833.2|2.1,EF-hand_8|PF13833.2|0.32,EF-hand_5|PF13202.2|5.9,EF-hand_5|PF13202.2|0.012,EF-hand_5|PF13202.2|34,EF-hand_5|PF13202.2|0.016 S_Transcript_223400:290-1078(+)
ATGGGTTGTAAGTTGTCAAAGATATTCTGGAAGAAGCCTAGGTACAAAGACTCTGCTGCTCTTGCATCTGAAACATTGTTTTCTGTCAATGAAGTGGAGGCATTGTATATACTTTACAAGCATCTAAGCAGCTCTATAGTTGATGATGGCCTCATTCAAAAGGAAGAATTTCGACAGGCACTTCTCAAGAACAGTCGGAAGCCAAATCTCTTTGTAGACAGGGTTTTTGATTTGTTTGATCTCAAGAAAAATGGGGTTATTGATTTTGGAGAGTTTGTTCGATCACTTAATGTCTTCCACCCCAACTCAACTGAAGCAGACAAGATAACATTTGTGTTCAATTTGTATGATCTTCGGAAAACTGGCTACATTGAACGCGAAGAGGTCAAGGAAATGGTGTTGGCTATCCTGGATGAATTAGGTTTGGCAGTATCAAATGATGTCACTGAAGCAATAGTAGAAAAGACTTTCACAGAAGCAGATTCCAAACTAGATGGTAGGATCGACCAAGAAGAGTGGAAGGAATTTATCTTCAGGAATCCATCGCTTATGAATAATATGACTCTTCCCTATCTAAAGGATCTTACCACAGCATTTCCAAGTTTCCTGGTCAACAGTCAAGTTCCGGATTATGATCTTATGGTCGACAAGGGATCTCATCAAGTTGCACAAGTGCTTCCAGAGGATAGCCCAGATGCATCAACCGGTAATAATCTGGTGACTAATCAGTCTTCAGACTCAATCTCGATAGATGGAGCCACACAGATGTTTGAAGTAAACCAGCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_223400.p1 GENE.S_Transcript_223400~~S_Transcript_223400.p1 ORF type:complete len:263 (+),score=59.97,EF-hand_1|PF00036.28|5.6,EF-hand_1|PF00036.28|7.2e-05,EF-hand_1|PF00036.28|0.0021,EF-hand_1|PF00036.28|0.011,EF-hand_7|PF13499.2|1.5e+02,EF-hand_7|PF13499.2|0.0093,EF-hand_7|PF13499.2|1.8e-06,EF-hand_7|PF13499.2|4.9e-06,EF-hand_6|PF13405.2|3.7,EF-hand_6|PF13405.2|0.0043,EF-hand_6|PF13405.2|0.014,EF-hand_6|PF13405.2|6.7,EF-hand_8|PF13833.2|0.00026,EF-hand_8|PF13833.2|2.1,EF-hand_8|PF13833.2|0.32,EF-hand_5|PF13202.2|5.9,EF-hand_5|PF13202.2|0.012,EF-hand_5|PF13202.2|34,EF-hand_5|PF13202.2|0.016 S_Transcript_223400:290-1078(+)
MGCKLSKIFWKKPRYKDSAALASETLFSVNEVEALYILYKHLSSSIVDDGLIQKEEFRQALLKNSRKPNLFVDRVFDLFDLKKNGVIDFGEFVRSLNVFHPNSTEADKITFVFNLYDLRKTGYIEREEVKEMVLAILDELGLAVSNDVTEAIVEKTFTEADSKLDGRIDQEEWKEFIFRNPSLMNNMTLPYLKDLTTAFPSFLVNSQVPDYDLMVDKGSHQVAQVLPEDSPDASTGNNLVTNQSSDSISIDGATQMFEVNQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST