Transcript Information: S_Transcript_2235.p1


Annotated TAIR IDAT3G53190.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19714171-19717537 | Forward length=483
E-Value2.3E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.986044868297
Replicate 21.9099131258744
Replicate 31.2662177012621
Condition 2: 8 Hour
Replicate 11.2094997493299
Replicate 21.7363225809937
Replicate 32.8633228126094
Condition 3: 24 Hour
Replicate 11.6302151858652
Replicate 21.6236760532309
Replicate 31.355214326245


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2235.p1 GENE.S_Transcript_2235~~S_Transcript_2235.p1 ORF type:3prime_partial len:335 (+),score=34.18,Pec_lyase_C|PF00544.15|3.3e-11 S_Transcript_2235:153-1154(+)
ATGCTTCTCCGAATCCATGTCTTGTTCTCTTTCTTCTTTGTCTCTTTGTTCAGCCCTCTCTCGCCACCTTTTGTCAGAGCCTCCTCCAACCTCATACTCCCCCATCAGCACCCTGATCCTGACGCTGTTGTTGAAGACTTTCACAGGATGGTCAATGTGTCACTCACTAGAAGGCAAATGCTGGAAATGTCTAAATCATCTTGCCTGACAGGCAATCCGATTGATGACTGCTGGCGGTGCGACCCCCATTGGGCATCCAACCGCCAAAGGCTGGCGGACTGCGGAATCGGGTTCGGGGCTGCGGCGAAGGGCGGGAAGGGAGGCCAAATCTATGTGGTCACAGACTCTTCAGATTCGGACCCTGTGAACCCGAAGCCGGGTACGCTCCGGTACGGTGTGGTCCAGGAGGAGCCACTGTGGATCATCTTCTCAAAGGATATGACCATCAAGCTCAGGTATGAACTTATTGTCAACAATTTCAAGACAATTGATGGCCGGGGGGCCAACGTACACATTACTGGCGGTGGCTGCATCACACTGCAGTATGTCTCCAATGTTATAATCCACAACATTCATGTCCACCATTGTGTACCTGCGGGCAACACCTTTGTGCGGTCCAGCCCCACCCATGTGGGTCACAGGGGGAAATCGGATGGTGATGGGATAACCATCTTTGGCGCCAGTAACATCTGGATAGATCACTGCACTCTCTCTTACTGCACTGATGGGTTGATTGATGCTACAATGGGGTCCACTGGGATCACCATTTCCAATAGTCATTTTTCACACCATAATGATGTCATGCTCTTAGGAGATAGTGAGGGCAATGTCTTGGATGCCGGTATGCAGGTTACAAAGAGAGTGGAAACAGATGACAAGGATTGGCAAGATTGGAACTGGAGGACGGAAGGGGACATTATGGTAAATGGAGCCTTTTTTGTACCTTCAGGGCAGGGTCTAAGTACTGAGTATGCCAAGGCCTTCAGTGTGGAACCTAAATCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2235.p1 GENE.S_Transcript_2235~~S_Transcript_2235.p1 ORF type:3prime_partial len:335 (+),score=34.18,Pec_lyase_C|PF00544.15|3.3e-11 S_Transcript_2235:153-1154(+)
MLLRIHVLFSFFFVSLFSPLSPPFVRASSNLILPHQHPDPDAVVEDFHRMVNVSLTRRQMLEMSKSSCLTGNPIDDCWRCDPHWASNRQRLADCGIGFGAAAKGGKGGQIYVVTDSSDSDPVNPKPGTLRYGVVQEEPLWIIFSKDMTIKLRYELIVNNFKTIDGRGANVHITGGGCITLQYVSNVIIHNIHVHHCVPAGNTFVRSSPTHVGHRGKSDGDGITIFGASNIWIDHCTLSYCTDGLIDATMGSTGITISNSHFSHHNDVMLLGDSEGNVLDAGMQVTKRVETDDKDWQDWNWRTEGDIMVNGAFFVPSGQGLSTEYAKAFSVEPKS

Click here to download the sequence:
Link to NCBI Protein BLAST