Transcript Information: S_Transcript_22353.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value6E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 179.519647690719
Replicate 279.337791248823
Replicate 388.893987922955
Condition 2: 8 Hour
Replicate 155.446014824546
Replicate 263.088613164029
Replicate 359.343319732268
Condition 3: 24 Hour
Replicate 186.680497690678
Replicate 294.825387635437
Replicate 393.926893364652


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22353.p1 GENE.S_Transcript_22353~~S_Transcript_22353.p1 ORF type:complete len:250 (+),score=33.32,zf-RVT|PF13966.2|4.5e-16,zf-RVT|PF13966.2|1.4e+02 S_Transcript_22353:1205-1954(+)
ATGCCTAAGGTGGTTGGTGGTCTAAATCTAGTTCAGATTTGTAAGTGGAATAGAGCTGCCATCTTTCGTTTATATTGGGATCTAGCAGCCAAGAAAGACAAGCTGTGGATACGATGGGTTCATGTTTATTATGTGAAGCATCAGGATTTAACTACTATGTCAATTCCTAATAATGGTAGCTGGATGATTAGGAAGATCATTCAAGCTAGAGAGGTGCTGGATTCTGTTAGAGGCAGGAATGTGTTGAATACCAAAGGCAAAGTGTCTATTCACAAAGTGTATCTTACTCTTCTTGAGCAGTTGCCAAAGATAGATTGGCATAGAGCAGTTATTGCTAATAAAGCCCATCCTAGAGCAGTACTGACTTTATGGTTGGTAATGTGGAATCGACTCCAGACTACTGATCAATTGAAAGCTTGGGACATGAATGTCGATGATCGATGTGTTTTCTGTAGCAATAATACTGAAACTTCTGAGCATATTTTCTATGAATGCAGTTATGCAAAGCAATTGTGGACTTTGATCTTTCAGTGGCAGCAGCTGACTTTTCGTAATGATTTGCAAGCATATATTCAGATAATGGCTAAGAAGCACTCTGTGAAGGCTTGTGTCTTTATTCAAACAGCTGCTGAGACTATTCATTCAATTTGGTTGGAGCGCAATCATAGAGTTTTTCAGAGTATTAGTAGAGGAGTGGAGAACTTGTTTCGAGATATTCAATTCTATGTATATAGTAGGTTGGGACGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22353.p1 GENE.S_Transcript_22353~~S_Transcript_22353.p1 ORF type:complete len:250 (+),score=33.32,zf-RVT|PF13966.2|4.5e-16,zf-RVT|PF13966.2|1.4e+02 S_Transcript_22353:1205-1954(+)
MPKVVGGLNLVQICKWNRAAIFRLYWDLAAKKDKLWIRWVHVYYVKHQDLTTMSIPNNGSWMIRKIIQAREVLDSVRGRNVLNTKGKVSIHKVYLTLLEQLPKIDWHRAVIANKAHPRAVLTLWLVMWNRLQTTDQLKAWDMNVDDRCVFCSNNTETSEHIFYECSYAKQLWTLIFQWQQLTFRNDLQAYIQIMAKKHSVKACVFIQTAAETIHSIWLERNHRVFQSISRGVENLFRDIQFYVYSRLGR*

Click here to download the sequence:
Link to NCBI Protein BLAST