Transcript Information: S_Transcript_223919.p1


Annotated TAIR IDAT5G48890.1
Annotated Gene NameC2H2-like zinc finger protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19820353-19820874 | Forward length=173
E-Value6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.370075579676
Replicate 213.096094336279
Replicate 315.286759855391
Condition 2: 8 Hour
Replicate 115.281295735272
Replicate 215.791893157454
Replicate 315.388446131938
Condition 3: 24 Hour
Replicate 114.251742170334
Replicate 216.482772055525
Replicate 318.073550536286


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_223919.p1 GENE.S_Transcript_223919~~S_Transcript_223919.p1 ORF type:complete len:187 (-),score=24.97 S_Transcript_223919:1661-2221(-)
ATGATTCTTCAGAGTGAAGGATCAGATGACATACAATCCAACAAAGATCAAGCCCTTCAGACAACAAATGAAGGAAACACAGACAACGATATAGGGTGGCTACATCTGGGTTTAGGTACAAACACAACTTCCACAGATCAACACCCAGGTTCTCCTTCAAGACCAGTTCCGGCCAAGATTTTCTCATGCAACTTCTGTATGAGGAAGTTCTTCAGTTCTCAGGCTCTAGGGGGACACCAGAATGCACACAAGAGAGAAAGAGGTGCAGCAAGAAGATTCCAATCACAAAGAATGATGTCAATGATGGGTCTCCCTGTTAACTCATCAATGCCAAGGTCACTGGGTGTGTATCCACATTCACTACTACATAAGCCCCACAGAGATGGTTACGTATTTGCTGCAAAGTTTAAAGATTCTAGTACTGGATTTAGTGCTCCTTGGAACCACTTCCCAATGGAGCACACAAAGGATGTGATGTGGCCAGGGAGTTATCGCTTGGATTCACAACTAGCTGGACAGCAGCCGGAGGAATCAAAGCTAGATCTAAACCTCCGTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_223919.p1 GENE.S_Transcript_223919~~S_Transcript_223919.p1 ORF type:complete len:187 (-),score=24.97 S_Transcript_223919:1661-2221(-)
MILQSEGSDDIQSNKDQALQTTNEGNTDNDIGWLHLGLGTNTTSTDQHPGSPSRPVPAKIFSCNFCMRKFFSSQALGGHQNAHKRERGAARRFQSQRMMSMMGLPVNSSMPRSLGVYPHSLLHKPHRDGYVFAAKFKDSSTGFSAPWNHFPMEHTKDVMWPGSYRLDSQLAGQQPEESKLDLNLRL*

Click here to download the sequence:
Link to NCBI Protein BLAST