Transcript Information: S_Transcript_223933.p1


Annotated TAIR IDAT4G00170.1
Annotated Gene NamePlant VAMP (vesicle-associated membrane protein) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:70732-72085 | Reverse length=239
E-Value5E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4918540482379
Replicate 21.7352755831753
Replicate 31.7959218658188
Condition 2: 8 Hour
Replicate 15.0318336703348
Replicate 24.2732744592736
Replicate 34.9497473839283
Condition 3: 24 Hour
Replicate 11.3090566885749
Replicate 21.1883646519433
Replicate 30.47232292893476


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_223933.p1 GENE.S_Transcript_223933~~S_Transcript_223933.p1 ORF type:complete len:267 (+),score=38.37,Motile_Sperm|PF00635.22|3.2e-25,Motile_Sperm|PF00635.22|1.6e+03 S_Transcript_223933:223-1023(+)
ATGATTACAAATCTTCTTCACATCCAACCTTCTGAACTCAAATTCCCTTTTCATGTAAACAAGCTGAGTACATGTTGGTTACAAATAACTAACAGAACTGATCATAATGTGGCTTTCAAGGTCAAAACAACCCATCCCAAAAAATATTGTGTCCGTCCTAATGTTGGCATTGTCTCTCCTGGCTGTACCTGTGTTATTAGAGTTGGTATGCAAGCTCAGAAAGATGTGATTCAACCTACTGTGTTAAAAGACAAGTTCCTAATCCAAAGTGTGATTGCACCAGTTGGGTTGAATCTTGATGACATAACCTCTGAACTGTTCAGAAAAGAAAGAGGCAATGGTCTCGAGGAGCAGAAGTTGAGGGTTGTTTATGTCACCGCTAATCCCCCATCTCCTATACCCGAAGGATCAGAAGAAGAGTGTTCCCCTCAAGCATCTGAGCTCGAAAATGCTGAACTCAGAAATCGTCTAATCGACTTTTTTGATTCCGCGTTGGTGAGTACAAGCGAATGCCAAGATCAGTTTTCAGAGGAAACCAAAACAGAAAACGACAATGAGGACCAAGTATCCCGGGAATCAGATTCTGCATCAAAATCTGAAGGGCAACCTAACAAGGACTGGGATACAGTTTCGAAGTTGATTGAGGAGCTAACCTTAGTAATTCTACAAAACCAAGATCTGCGACATGAATTGGAGATCAAAAGGAAACGAGCCAAGAGGATATGGAGTTCCAACTCCTCAATTTTAGTTGCACTCTTGGCCTGTTTTATGGGGCTTGTAGTCGGGTATGTGATAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_223933.p1 GENE.S_Transcript_223933~~S_Transcript_223933.p1 ORF type:complete len:267 (+),score=38.37,Motile_Sperm|PF00635.22|3.2e-25,Motile_Sperm|PF00635.22|1.6e+03 S_Transcript_223933:223-1023(+)
MITNLLHIQPSELKFPFHVNKLSTCWLQITNRTDHNVAFKVKTTHPKKYCVRPNVGIVSPGCTCVIRVGMQAQKDVIQPTVLKDKFLIQSVIAPVGLNLDDITSELFRKERGNGLEEQKLRVVYVTANPPSPIPEGSEEECSPQASELENAELRNRLIDFFDSALVSTSECQDQFSEETKTENDNEDQVSRESDSASKSEGQPNKDWDTVSKLIEELTLVILQNQDLRHELEIKRKRAKRIWSSNSSILVALLACFMGLVVGYVIK*

Click here to download the sequence:
Link to NCBI Protein BLAST