Transcript Information: S_Transcript_223942.p1


Annotated TAIR IDAT5G54090.1
Annotated Gene NameDNA mismatch repair protein MutS, type 2
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21948283-21952550 | Reverse length=796
E-Value9E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8468104570168
Replicate 23.5300463292024
Replicate 36.6393849900962
Condition 2: 8 Hour
Replicate 112.155472480766
Replicate 213.423109183836
Replicate 37.6737051377933
Condition 3: 24 Hour
Replicate 17.8641580566139
Replicate 26.5725053571407
Replicate 37.3143928774837


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_223942.p1 GENE.S_Transcript_223942~~S_Transcript_223942.p1 ORF type:5prime_partial len:100 (-),score=32.85 S_Transcript_223942:354-653(-)
CCCAAGCCCACAGGAACAGAACCAAGTGTGCAAGGAGAACCAGTTAACAGCCAGAAGCATGCAGCTGGTGATAATGCTTCCGCTTCAGAAAGTGCAATTGGTATTCCTGTCGAGGAGTCTGAGCAGATGTCATCAGGTGCAGAAAACAGAACTAGATTGCCTATGGTGGGTACTGTTGTTCAACTTCCTTCACTTAGGACCAAGGCAACAGTTCTAAAGGTGGAATCATCTAAAGAAGAGATTTTAGTTCAAGCTGGCAAGTTGAAGCTGAAGTTGAAAATATCTGATATTAAGATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_223942.p1 GENE.S_Transcript_223942~~S_Transcript_223942.p1 ORF type:5prime_partial len:100 (-),score=32.85 S_Transcript_223942:354-653(-)
PKPTGTEPSVQGEPVNSQKHAAGDNASASESAIGIPVEESEQMSSGAENRTRLPMVGTVVQLPSLRTKATVLKVESSKEEILVQAGKLKLKLKISDIKI*

Click here to download the sequence:
Link to NCBI Protein BLAST