Transcript Information: S_Transcript_223949.p1


Annotated TAIR IDAT5G54090.1
Annotated Gene NameDNA mismatch repair protein MutS, type 2
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21948283-21952550 | Reverse length=796
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.93928239653578
Replicate 20.25956223008841
Replicate 30.43394673137884
Condition 2: 8 Hour
Replicate 10.75266083472234
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.26663307736879
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_223949.p1 GENE.S_Transcript_223949~~S_Transcript_223949.p1 ORF type:complete len:85 (+),score=9.03 S_Transcript_223949:33-287(+)
ATGGTAGGCCCTTCAATGACTGGAAGCATACATATTAGACTTCATCCTTTGTACAATATCATCAACAGATATAATGAAAGCTTAGATATCCAAAATGTGACAGATGTTAAGGTTTGTGAGATAGAAACATGGAACTCCTCTCAGAATCTTGTAAGTTGGCTTCAAGTTCACTACATCAACTTCCACGCACGCATTTTCAAAAGTATAATTGCTGCTTTCCTAATGATGGCAGCAAGGCCTACTGCTTTCAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_223949.p1 GENE.S_Transcript_223949~~S_Transcript_223949.p1 ORF type:complete len:85 (+),score=9.03 S_Transcript_223949:33-287(+)
MVGPSMTGSIHIRLHPLYNIINRYNESLDIQNVTDVKVCEIETWNSSQNLVSWLQVHYINFHARIFKSIIAAFLMMAARPTAFK*

Click here to download the sequence:
Link to NCBI Protein BLAST