Transcript Information: S_Transcript_224213.p1


Annotated TAIR IDAT3G53690.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19898997-19900044 | Reverse length=320
E-Value4.2E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8693262787257
Replicate 22.49767428953
Replicate 32.58496570444
Condition 2: 8 Hour
Replicate 12.8165609852817
Replicate 21.7487428855851
Replicate 32.5280250528819
Condition 3: 24 Hour
Replicate 11.0009784887873
Replicate 21.9548301090111
Replicate 31.4956468380392


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_224213.p1 GENE.S_Transcript_224213~~S_Transcript_224213.p1 ORF type:complete len:371 (+),score=71.24,IBR|PF01485.17|60,IBR|PF01485.17|51,IBR|PF01485.17|2e-11,IBR|PF01485.17|1.5e-05 S_Transcript_224213:519-1631(+)
ATGGCGACTCATCACCACCAAGTAAGTGACGTCAAAATTCTTCAAGTAAATGACCATAGCAACATGATGAAAAAGAACAAAATCAGCTTTCCGAAAATCGCGATAATTGAACTGAATGAAGATGATGATGACTGTGTTGTTTTTGTGAAAAAAGAGAAGAACTTGTTGGTGCCTACTAATGGAAATGGCATTAAGGACCCAATTTGTGTTGATGATGAGTATTGTAAGAAAACCCCTATATTGAAGAATAATAACAAGAAGAATGTTTTGATGATGGGTGTTGATGATATACAATATGTTGATGACTATGATGATGAAATTAGGATTCTTCGTGTAATACCCTCATCATCATCATCCCCTGGAAAGAGAAGGAAGCCCTTTAGTAGTTTTTCAGTGACTGAAAAAGGCGAATCTTCGGGGTCGAAATATGTCGAAAACGTTGATGAAGTTGTTGAGATGGAGCCTTTGGAGGAGGAAGGGGTGATGTTTACTTGTGAAATTTGTGCTGATACTAAGCCCTCTAAGGAGAATTTTAAAATAAAGGGTTGTTCTCACTCTTATTGCTATGACTGTATGACAAGTTATGTTGCGTCGAAGCTCCAAGAGGGTGTTCCTCGTGTTAATTGTCCGGTTCCTGGTTGTCCTGGAGTTTTGGAGCCGGAGTATTGTAGGGATATACTCCCTCCTGAGGTTTTTGATAGGTGGGGCAAGTTGTTGTGTGAGTCTGTCATAATCGCCTCGCAGAAGTTCTATTGCCCGTTTAAGGATTGTTCAGCATTGTTGATTGATGATGGGGGAGAGACGGTGACACAATCCGAGTGTCCGAGTTGTTTTAGATTGTTTTGTGTGCAATGTAAGGTTGCGTGGCATGATGGTATTCCGTGTGCTGAGTATCAGAAGCTGAGTAAGGATGAGCGAAAGAAAGAGGATATCATGCTGAGGAACCTCGCTAAGAGCCAGAATTGGCAACGGTGCCCAACTTGCAAGTTCTATGTGGAGAAGTCAGAAGGTTGCCTCTATATGAAATGCAGGTGTGGAGTTGCTTTTTGCTACAAGTGTGGAGCTATCCATACCGATCATAGGTACCATTACTGTGCAAAATGTGGACGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_224213.p1 GENE.S_Transcript_224213~~S_Transcript_224213.p1 ORF type:complete len:371 (+),score=71.24,IBR|PF01485.17|60,IBR|PF01485.17|51,IBR|PF01485.17|2e-11,IBR|PF01485.17|1.5e-05 S_Transcript_224213:519-1631(+)
MATHHHQVSDVKILQVNDHSNMMKKNKISFPKIAIIELNEDDDDCVVFVKKEKNLLVPTNGNGIKDPICVDDEYCKKTPILKNNNKKNVLMMGVDDIQYVDDYDDEIRILRVIPSSSSSPGKRRKPFSSFSVTEKGESSGSKYVENVDEVVEMEPLEEEGVMFTCEICADTKPSKENFKIKGCSHSYCYDCMTSYVASKLQEGVPRVNCPVPGCPGVLEPEYCRDILPPEVFDRWGKLLCESVIIASQKFYCPFKDCSALLIDDGGETVTQSECPSCFRLFCVQCKVAWHDGIPCAEYQKLSKDERKKEDIMLRNLAKSQNWQRCPTCKFYVEKSEGCLYMKCRCGVAFCYKCGAIHTDHRYHYCAKCGR*

Click here to download the sequence:
Link to NCBI Protein BLAST