Transcript Information: S_Transcript_224512.p1


Annotated TAIR IDAT3G18970.1
Annotated Gene Namemitochondrial editing factor 20
Annotated Gene Symbol(s)MEF20
Annotation TypeOrtholog
Chromosome Positionchr3:6543699-6545117 | Reverse length=472
E-Value1.6E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44079505151438
Replicate 20.31975057329732
Replicate 30.34365346739628
Condition 2: 8 Hour
Replicate 11.1479506174854
Replicate 21.2042817073145
Replicate 31.279833500092
Condition 3: 24 Hour
Replicate 10.18091000820368
Replicate 20.23461502667026
Replicate 30.41775642907025


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_224512.p1 GENE.S_Transcript_224512~~S_Transcript_224512.p1 ORF type:5prime_partial len:483 (+),score=62.22,PPR|PF01535.16|8.7,PPR|PF01535.16|1.1,PPR|PF01535.16|2.9e+03,PPR|PF01535.16|0.00062,PPR|PF01535.16|0.00022,PPR|PF01535.16|8.4e-06,PPR|PF01535.16|0.12,PPR|PF01535.16|23,PPR_2|PF13041.2|30,PPR_2|PF13041.2|0.00011,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|8.7e-12,PPR_2|PF13041.2|1.4e-05,PPR_2|PF13041.2|7,PPR_2|PF13041.2|5.4e+03,PPR_1|PF12854.3|5.2e+03,PPR_1|PF12854.3|32,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|3.7,PPR_1|PF12854.3|0.097,PPR_1|PF12854.3|2.8e-06,PPR_1|PF12854.3|0.29,PPR_3|PF13812.2|8.6e+03,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|5.1,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.0092,PPR_3|PF13812.2|30,PPR_3|PF13812.2|2.7 S_Transcript_224512:3-1451(+)
TACCTACCTTTATGGCAAACCTTTGAGCTTGACCTTAACATTATGTCCTCAGTTTCATGGCTGCTTAAATTTGCTCTCCTTAATCGCAAACCAAAATCTCTCAACCAAGTAAAACAAATCCACGCCTTACTTATAACAACAGGCCTTAAAACTCCCTCCATATTAGCAAAACTTATTGAATATTGTTGTGCTCTTACACCTGATCACCAAACACCCCACCATGCCCATCTCATTGTCAACCATGAACATGAATCAAAAGTTTTCCTTTTAAATACTTTGATCAAATGCAGCCAACCCAGATGCTCCACTCTACTATTTGCCAACTGGGTTTCTAATACTTCCATTGTTTTTGATGATCACACCTTCATTTTCGCTCTTGGCGCTTGTGCTCGAGCACTGTCGTTATCGGCCTTGTATGAAGGGATGCAGATACACTGTCGTGCAGTGAAACTTGGGTTTATGTCAGACTTGCTAGTGTCCACAACAAGTATCCATTTTTATGCTAGCAATGTGTGCATGCGTCATGCACGGAAGGTGTTCGATGAAATGCCTGTGAGAAGTAGTGTCACTTGGAATGCTCTTATAACAGGGTATTCGTCACAGAAACAGAAACCCAATGAGAATTCTGTTAACGCATTAGTGATCTTTAAGGATATGTTGGTTGTTGATGTCAAACCGAATGGTACTACTATGGTTTGTGTGCTTTCTGCAGCTTCGCAGTTGGGCGCCTTAGAGATTGGGAGTTGTTTCCATGGGTATGTTGTGAAAACCATAAAGGCTCCTGAGACTGATGTGTATGTGAGTACTGGTTTGTTGGACATGTACTCTAAGTGTGGGTGTCTCGATGTTGCGTATAAAGTATTCTCGTCGATGAAGGAGAAGAATGTACTCACTTGGACTGCAATGGCCACAGGATTAGCTTTCCATGGGAAAGGGAAAGACGCTATATCGCTGTTAGATCAAATGAAACAGCATAAGATAATGCCAAATGCTGTTACGTTTACTAGTTTGTTGTCTGCTTGTTGTCATGCAGGGCTTCTGGAAGAAGGGCTTCATTTGCTTTACAATATGAAGAGAGATTTTGGTCTCACACCTCAGATTGAGCATTATGGGTGTATTGTTGACCTTCTTGGAAGAGCAGGGCATTTGAGGGAAGCATATGACTTAATAATCAAGATGCCTGTTAAACCTGATCCGATTTTGTGGAGGAGTTTGCTCGGTTCGTCTAGGCTACATGGGGATGCAGAGATGGGTGAGAAGGTGGGGAAGATTCTTCTTCGGGTACAGCCAGATCTGAGTCTTGGAGATGTAAGACCTCCTAGTGAAGATTATGTAGCGCTGTCGAATGTTTATGCATTAGCTGGAAGGTGGCAGGATGTTGGAACTGTGAGGGGAGAGATGAGGATCAAGGGTATAGAGATCAAACCTGGCCATAGTGCTGTCCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_224512.p1 GENE.S_Transcript_224512~~S_Transcript_224512.p1 ORF type:5prime_partial len:483 (+),score=62.22,PPR|PF01535.16|8.7,PPR|PF01535.16|1.1,PPR|PF01535.16|2.9e+03,PPR|PF01535.16|0.00062,PPR|PF01535.16|0.00022,PPR|PF01535.16|8.4e-06,PPR|PF01535.16|0.12,PPR|PF01535.16|23,PPR_2|PF13041.2|30,PPR_2|PF13041.2|0.00011,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|8.7e-12,PPR_2|PF13041.2|1.4e-05,PPR_2|PF13041.2|7,PPR_2|PF13041.2|5.4e+03,PPR_1|PF12854.3|5.2e+03,PPR_1|PF12854.3|32,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|3.7,PPR_1|PF12854.3|0.097,PPR_1|PF12854.3|2.8e-06,PPR_1|PF12854.3|0.29,PPR_3|PF13812.2|8.6e+03,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|5.1,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.0092,PPR_3|PF13812.2|30,PPR_3|PF13812.2|2.7 S_Transcript_224512:3-1451(+)
YLPLWQTFELDLNIMSSVSWLLKFALLNRKPKSLNQVKQIHALLITTGLKTPSILAKLIEYCCALTPDHQTPHHAHLIVNHEHESKVFLLNTLIKCSQPRCSTLLFANWVSNTSIVFDDHTFIFALGACARALSLSALYEGMQIHCRAVKLGFMSDLLVSTTSIHFYASNVCMRHARKVFDEMPVRSSVTWNALITGYSSQKQKPNENSVNALVIFKDMLVVDVKPNGTTMVCVLSAASQLGALEIGSCFHGYVVKTIKAPETDVYVSTGLLDMYSKCGCLDVAYKVFSSMKEKNVLTWTAMATGLAFHGKGKDAISLLDQMKQHKIMPNAVTFTSLLSACCHAGLLEEGLHLLYNMKRDFGLTPQIEHYGCIVDLLGRAGHLREAYDLIIKMPVKPDPILWRSLLGSSRLHGDAEMGEKVGKILLRVQPDLSLGDVRPPSEDYVALSNVYALAGRWQDVGTVRGEMRIKGIEIKPGHSAVH*

Click here to download the sequence:
Link to NCBI Protein BLAST