Transcript Information: S_Transcript_224519.p2


Annotated TAIR IDAT1G62910.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23299060-23300958 | Forward length=632
E-Value5E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26091177681549
Replicate 21.297811150442
Replicate 30.36162227614903
Condition 2: 8 Hour
Replicate 11.2544347245372
Replicate 20.43866369881817
Replicate 30.41795779617611
Condition 3: 24 Hour
Replicate 11.070827622088
Replicate 20.22219423114066
Replicate 32.2254745063338


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_224519.p2 GENE.S_Transcript_224519~~S_Transcript_224519.p2 ORF type:3prime_partial len:102 (+),score=9.66,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|5.7e-12,PPR_2|PF13041.2|1.9e-19,PPR_1|PF12854.3|7.3e-10,PPR_1|PF12854.3|1.6e-10,PPR_1|PF12854.3|4.8e-08,PPR|PF01535.16|6.9e+02,PPR|PF01535.16|0.00014,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|0.047,PPR_3|PF13812.2|6.4e+02,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|1.5e-05,PPR_3|PF13812.2|2.7 S_Transcript_224519:188-490(+)
ATGTTGGATAAAATGGTCAAGCTTGGTGTCCAACCTAGCATTGTTACCTTTGGCACTATGGTCAAAGGCCTTTGCAGAGCTGGCAACAATGGGGGTGCTCTACATTTGCTTAGGCAAATGCAACTAGGCCCCTCGCGTCCTGACGTGACTACCTATAACACCATCATTGATAGCCTTTGTAAAGGCAGGTTCTTGCCTCAGGCCCTCAAGCTTTTCTCCGAGATGAAAAGCCTGGGCATTTCACCCGATGTCATCACTTATAATACGTTAGTTAGAGGCTTGTGCACTTTGGGGCGTTGGAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_224519.p2 GENE.S_Transcript_224519~~S_Transcript_224519.p2 ORF type:3prime_partial len:102 (+),score=9.66,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|5.7e-12,PPR_2|PF13041.2|1.9e-19,PPR_1|PF12854.3|7.3e-10,PPR_1|PF12854.3|1.6e-10,PPR_1|PF12854.3|4.8e-08,PPR|PF01535.16|6.9e+02,PPR|PF01535.16|0.00014,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|0.047,PPR_3|PF13812.2|6.4e+02,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|1.5e-05,PPR_3|PF13812.2|2.7 S_Transcript_224519:188-490(+)
MLDKMVKLGVQPSIVTFGTMVKGLCRAGNNGGALHLLRQMQLGPSRPDVTTYNTIIDSLCKGRFLPQALKLFSEMKSLGISPDVITYNTLVRGLCTLGRWK

Click here to download the sequence:
Link to NCBI Protein BLAST