Transcript Information: S_Transcript_224522.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value7E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.94893718526945
Replicate 30.99154495073121
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 31.1460133120958
Condition 3: 24 Hour
Replicate 10.46978244065794
Replicate 20.4873937973408
Replicate 30.27120477854963


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_224522.p1 GENE.S_Transcript_224522~~S_Transcript_224522.p1 ORF type:internal len:93 (+),score=19.68,PPR_2|PF13041.2|44,PPR_2|PF13041.2|8.5e-14,PPR_1|PF12854.3|6.8,PPR_1|PF12854.3|3.1e-05,PPR_1|PF12854.3|2.2e-05,PPR|PF01535.16|2.5,PPR|PF01535.16|0.00023,PPR|PF01535.16|0.41 S_Transcript_224522:3-278(+)
AGGCTTCGACCTGACAAGCATTCTGTGGGTATTCTTGCTACTTGTTGCTGTCACTTAGGCCGTGTTGATTTTGGGTTCTCCCTTCTTGGTAAACGCCTTAAGCTTGGGTATCCTCTCGATGCTGTCATCTTCAACACTCTTCTTAATGGCCTTGTCCGTTCTGAGCAATTGCCTCAAGCTGTTCGATTGCTGGATAAAATTGTCAAGCTTGGCTTCCAACCGACTCTTGTTACCTTTAGCACCATGGTCAAAGGTCTTTGCAGTACTGGTGACAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_224522.p1 GENE.S_Transcript_224522~~S_Transcript_224522.p1 ORF type:internal len:93 (+),score=19.68,PPR_2|PF13041.2|44,PPR_2|PF13041.2|8.5e-14,PPR_1|PF12854.3|6.8,PPR_1|PF12854.3|3.1e-05,PPR_1|PF12854.3|2.2e-05,PPR|PF01535.16|2.5,PPR|PF01535.16|0.00023,PPR|PF01535.16|0.41 S_Transcript_224522:3-278(+)
RLRPDKHSVGILATCCCHLGRVDFGFSLLGKRLKLGYPLDAVIFNTLLNGLVRSEQLPQAVRLLDKIVKLGFQPTLVTFSTMVKGLCSTGDN

Click here to download the sequence:
Link to NCBI Protein BLAST