Transcript Information: S_Transcript_224523.p1


Annotated TAIR IDAT3G16710.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5690020-5691543 | Forward length=507
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3340544088098
Replicate 20.64619048913223
Replicate 30.84882885740421
Condition 2: 8 Hour
Replicate 11.4276411927788
Replicate 21.029666673795
Replicate 30.71350117506214
Condition 3: 24 Hour
Replicate 10.45700593076557
Replicate 20.37931065399745
Replicate 30.73872096584022


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_224523.p1 GENE.S_Transcript_224523~~S_Transcript_224523.p1 ORF type:3prime_partial len:239 (-),score=29.80,PPR|PF01535.16|4.8e+02,PPR|PF01535.16|17,PPR|PF01535.16|0.019,PPR_1|PF12854.3|66,PPR_1|PF12854.3|0.00029 S_Transcript_224523:3-716(-)
ATGAAGATAAGTGATTTCGCAGCCTTTGTTCATAGTACTAATTTCTTCACCGTATCATCCTCCATTATTGCCGGTAATCCTCTTAGTCCCCGTCTTCCTCTTTTTTCTTCATTTTGTTGCTGTTTCTCCTACTTTCCAAACTCCAGAAATACAAGAGATTTGGATGACCCTGAAATTGAACAATTTCTGAAATCCTTGAGGAATCAATGCAAGTTAGGGTTTACGAATATCGACCGACCCCTTTCTCTCTTCCATCGAATGGTCTCTTTAAGACCTCTCCCTACTGTCATTGATTTCACTCAGCTGTTTACTGCTATGCTCAACATCAAACCTTTCCCACCTTTCTCCACTGTCATCTCTCTCTCCAGGCATCTTGAATTCTCAACTGGGCTTCGACCTGACAAGCATTCTGTGGGTATTCTTGCTACTTGTTACTCTCGCTTAGGCCGTCTTGATTATGGTTTCTCCCTTCTCGGTAAACGCCTTAAACTAGGGTATCTCTTGATGCTGTCATCTTCAACACTCTCTTTGATGGCCTTGTTCTTTCTAACCAACTGCCCCAAGCTGTTCGATTCTTGGATCAAATTGTCAAGCTTGGCTTCCAACCTGACCATTGCACATGATGTCATCACTTACACTACCTTACTTAGAGGCTTGTGCACTTTGGGGCATTGGCAAGATGTTGAGGCATTGTTAACTGAAAAGCTAGACACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_224523.p1 GENE.S_Transcript_224523~~S_Transcript_224523.p1 ORF type:3prime_partial len:239 (-),score=29.80,PPR|PF01535.16|4.8e+02,PPR|PF01535.16|17,PPR|PF01535.16|0.019,PPR_1|PF12854.3|66,PPR_1|PF12854.3|0.00029 S_Transcript_224523:3-716(-)
MKISDFAAFVHSTNFFTVSSSIIAGNPLSPRLPLFSSFCCCFSYFPNSRNTRDLDDPEIEQFLKSLRNQCKLGFTNIDRPLSLFHRMVSLRPLPTVIDFTQLFTAMLNIKPFPPFSTVISLSRHLEFSTGLRPDKHSVGILATCYSRLGRLDYGFSLLGKRLKLGYLLMLSSSTLSLMALFFLTNCPKLFDSWIKLSSLASNLTIAHDVITYTTLLRGLCTLGHWQDVEALLTEKLDT

Click here to download the sequence:
Link to NCBI Protein BLAST